C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005HW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000007944-ENSDARG00000025467 CGP 7955 5:57677620-57714995
GeneTranscriptPositionBiotype
ENSDARG00000007944 (lhx1b)
LIM homeobox 1b 		ENSDART00000021159 (lhx1b-001) 57677620-57683358 protein_coding
ENSDARG00000025467 (aatf)
apoptosis antagonizing transcription factor 		ENSDART00000028854 (aatf-001) 57687054-57714908 protein_coding
ENSDART00000148749 (aatf-002) 57687063-57689858 protein_coding
ENSDART00000150057 (aatf-003) 57699319-57714995 processed_transcript
CIL_0005HW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000273706-ENSG00000275700 CGP 9606 17:36936785-37056871
GeneTranscriptPositionBiotype
ENSG00000273706 (LHX1)
LIM homeobox 1 		ENST00000614239 (LHX1-001) 36937475-36944612 protein_coding
ENST00000616237 (LHX1-003) 36938460-36941394 retained_intron
ENST00000619297 (LHX1-005) 36936785-36937846 processed_transcript
ENST00000619939 (LHX1-002) 36937635-36941531 retained_intron
ENST00000621767 (LHX1-004) 36942298-36943685 protein_coding
ENSG00000276707 (RP11-445F12.2)
 ENST00000614759 (RP11-445F12.2-001) 36940049-36943456 antisense
ENSG00000277579 (CTC-268N12.3)
 ENST00000615419 (CTC-268N12.3-001) 37034668-37043252 sense_intronic
ENSG00000277589 (RP11-333J10.3)
 ENST00000620689 (RP11-333J10.3-001) 36998598-37000034 sense_intronic
ENSG00000277911 (RP11-333J10.2)
 ENST00000613270 (RP11-333J10.2-001) 36980167-36980422 sense_intronic
ENSG00000278638 (CTC-268N12.2)
 ENST00000619606 (CTC-268N12.2-001) 37045462-37052775 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005HW_0001ENSDARG00000007944ENSDART00000021159ENSDARG00000025467ENSDART00000028854ENSDART00000148749ENSDART00000150057CIL_0005HW_0002ENSG00000273706ENST00000614239ENST00000616237ENST00000619297ENST00000619939ENST00000621767ENSG00000276707ENST00000614759ENSG00000277579ENST00000615419ENSG00000277589ENST00000620689ENSG00000277911ENST00000613270ENSG00000278638ENST00000619606
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005HW_0001ENSDARG00000007944ENSDART00000021159ENSDARG00000025467ENSDART00000028854ENSDART00000148749ENSDART00000150057CIL_0005HW_0002ENSG00000273706ENST00000614239ENST00000619297ENST00000619939ENST00000621767ENSG00000276707ENST00000614759ENSG00000277579ENST00000615419ENSG00000277589ENST00000620689ENSG00000277911ENST00000613270ENSG00000278638ENST00000619606
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007944 ENSDART00000021159 N/A N/A N/A 0.564±0.21 N/A N/A 0.110±0.03 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000025467 ENSDART00000028854 N/A N/A N/A 3.172±1.65 N/A N/A 4.522±0.38 7.076±6.13 2.601±0.00 N/A 2.364±0.00 N/A N/A N/A
ENSDART00000148749 N/A N/A N/A 2.392±0.62 N/A N/A 8.624±4.80 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150057 N/A N/A N/A N/A N/A N/A N/A 4.324±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000273706 ENST00000614239 N/A N/A 0.843±0.00 0.022±0.00 N/A N/A N/A 4.362±0.00 N/A N/A N/A 0.531±0.00 0.016±0.00 0.152±0.05
ENST00000616237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.104±0.00
ENST00000619939 N/A N/A N/A N/A N/A 0.271±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621767 N/A N/A N/A N/A 0.142±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000276707 ENST00000614759 N/A N/A N/A 0.086±0.00 N/A N/A N/A 7.457±0.00 N/A N/A N/A N/A 0.128±0.00 N/A
ENSG00000277579 ENST00000615419 0.027±0.00 0.259±0.00 N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A 0.136±0.00 0.442±0.00 0.168±0.00 0.158±0.00
ENSG00000277589 ENST00000620689 0.045±0.00 0.427±0.00 N/A 0.059±0.00 0.241±0.09 0.351±0.00 0.084±0.00 0.216±0.00 0.098±0.05 0.043±0.01 0.212±0.00 0.188±0.23 0.107±0.00 0.121±0.05
ENSG00000277911 ENST00000613270 N/A 0.524±0.00 N/A N/A N/A N/A N/A 0.415±0.00 N/A N/A N/A 0.178±0.00 N/A N/A
ENSG00000278638 ENST00000619606 0.044±0.00 0.413±0.00 N/A 0.149±0.00 0.048±0.00 0.061±0.00 0.147±0.00 0.093±0.00 N/A N/A N/A 0.100±0.02 N/A 0.104±0.00

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