C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005JD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000039181-ENSDARG00000068194 CGP 7955 5:27596889-27722714
GeneTranscriptPositionBiotype
ENSDARG00000039181 (trpm3)
transient receptor potential cation channel, subfamily M, member 3 		ENSDART00000088033 (trpm3-201) 27596889-27707872 protein_coding
ENSDART00000147188 (trpm3-001) 27596889-27707881 protein_coding
ENSDARG00000068194 (klf9)
Kruppel-like factor 9 		ENSDART00000098473 (klf9-001) 27719779-27722714 protein_coding
ENSDARG00000092641 (si:dkey-148e22.3)
si:dkey-148e22.3 		ENSDART00000142210 (si:dkey-148e22.3-001) 27608731-27612001 antisense
CIL_0005JD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000052387-ENSMUSG00000033863 CGP 10090 19:22139119-23166911
GeneTranscriptPositionBiotype
ENSMUSG00000033863 (Klf9)
Kruppel-like factor 9 		ENSMUST00000036884 (Klf9-201) 23141226-23166911 protein_coding
ENSMUSG00000044387 (2410080I02Rik)
RIKEN cDNA 2410080I02 gene 		ENSMUST00000142712 (2410080I02Rik-001) 23134900-23135717 lincRNA
ENSMUSG00000052387 (Trpm3)
transient receptor potential cation channel, subfamily M, member 3 		ENSMUST00000037901 (Trpm3-201) 22448283-22989884 protein_coding
ENSMUST00000074770 (Trpm3-202) 22139119-22989882 protein_coding
ENSMUST00000087576 (Trpm3-203) 22139119-22989882 protein_coding
ENSMUST00000099564 (Trpm3-204) 22692619-22926489 protein_coding
ENSMUST00000099566 (Trpm3-205) 22692619-22772372 protein_coding
ENSMUST00000099569 (Trpm3-206) 22139119-22989882 protein_coding
ENSMUSG00000080626 (Mir1192)
microRNA 1192 		ENSMUST00000116976 (Mir1192-201) 23149431-23149551 miRNA
ENSMUSG00000097930 (C330002G04Rik)
RIKEN cDNA C330002G04 gene 		ENSMUST00000181623 (C330002G04Rik-201) 23037390-23075853 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005JD_0001ENSDARG00000039181ENSDART00000088033ENSDART00000147188ENSDARG00000068194ENSDART00000098473ENSDARG00000092641ENSDART00000142210CIL_0005JD_0002ENSMUSG00000033863ENSMUST00000036884ENSMUSG00000044387ENSMUST00000142712ENSMUSG00000052387ENSMUST00000037901ENSMUST00000074770ENSMUST00000087576ENSMUST00000099564ENSMUST00000099566ENSMUST00000099569ENSMUSG00000080626ENSMUST00000116976ENSMUSG00000097930ENSMUST00000181623
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005JD_0001ENSDARG00000039181ENSDART00000088033ENSDART00000147188ENSDARG00000068194ENSDART00000098473ENSDARG00000092641ENSDART00000142210CIL_0005JD_0002ENSMUSG00000033863ENSMUST00000036884ENSMUSG00000044387ENSMUST00000142712ENSMUSG00000052387ENSMUST00000037901ENSMUST00000074770ENSMUST00000087576ENSMUST00000099564ENSMUST00000099566ENSMUST00000099569ENSMUSG00000080626ENSMUST00000116976ENSMUSG00000097930ENSMUST00000181623
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000039181 ENSDART00000088033 N/A N/A N/A 1.787±0.00 N/A N/A 0.019±0.00 N/A 0.015±0.00 N/A 0.391±0.00 N/A N/A N/A
ENSDART00000147188 N/A N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000068194 ENSDART00000098473 N/A N/A N/A 55.809±19.77 N/A N/A 36.839±26.44 95.615±0.00 30.922±0.00 N/A 34.505±0.00 N/A N/A N/A
ENSDARG00000092641 ENSDART00000142210 N/A N/A N/A 0.176±0.00 N/A N/A 0.154±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033863 ENSMUST00000036884 27.413±1.84 55.596±12.88 20.326±1.69 4.855±6.71 26.663±11.37 36.028±4.72 14.682±2.65 31.815±6.58 11.660±9.69 59.839±31.55 8.481±1.22 36.313±9.87 3.711±1.49 9.040±3.10
ENSMUSG00000044387 ENSMUST00000142712 0.237±0.08 0.290±0.10 0.189±0.15 0.275±0.25 0.509±0.30 0.270±0.12 0.217±0.00 0.625±0.26 0.180±0.15 0.243±0.00 1.241±0.50 0.232±0.05 0.278±0.26 0.203±0.03
ENSMUSG00000052387 ENSMUST00000037901 0.050±0.00 0.050±0.02 N/A 0.583±0.00 0.097±0.04 0.086±0.04 N/A N/A 0.008±0.01 0.056±0.00 0.043±0.01 0.199±0.11 0.015±0.00 N/A
ENSMUST00000074770 0.086±0.00 0.045±0.02 0.008±0.00 N/A 0.081±0.02 0.048±0.02 N/A 0.288±0.00 0.009±0.00 N/A 0.065±0.00 0.285±0.01 0.010±0.00 N/A
ENSMUST00000087576 N/A 0.023±0.01 N/A 0.614±0.00 N/A N/A 0.175±0.00 0.317±0.01 0.003±0.00 N/A 0.027±0.00 0.084±0.00 0.002±0.00 N/A
ENSMUST00000099564 N/A N/A 0.015±0.00 N/A 0.104±0.09 0.055±0.02 0.063±0.00 N/A 0.009±0.00 N/A 0.022±0.00 0.348±0.00 0.040±0.00 N/A
ENSMUST00000099566 N/A N/A N/A 1.508±0.00 N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A 0.013±0.00 0.234±0.00
ENSMUST00000099569 N/A 0.015±0.00 N/A 0.536±0.00 0.070±0.00 N/A N/A 0.134±0.00 0.003±0.00 N/A 0.032±0.00 0.230±0.12 N/A N/A
ENSMUSG00000080626 ENSMUST00000116976 1100.610±0.00 N/A N/A N/A N/A N/A N/A 2286.660±0.00 11.016±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000097930 ENSMUST00000181623 0.047±0.00 0.047±0.00 0.012±0.01 0.026±0.02 0.054±0.02 N/A N/A 1.264±0.42 0.020±0.02 0.459±0.01 N/A 0.133±0.11 0.070±0.09 0.112±0.06

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