C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005LV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000016233-ENSDARG00000004869 CGP 7955 2:11274377-11304124
GeneTranscriptPositionBiotype
ENSDARG00000004869 (penka)
proenkephalin a 		ENSDART00000142013 (penka-001) 11299996-11304124 protein_coding
ENSDARG00000016233 (sdr16c5a)
short chain dehydrogenase/reductase family 16C, member 5a 		ENSDART00000019392 (sdr16c5a-001) 11274377-11295652 protein_coding
CIL_0005LV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170786-ENSG00000181195 CGP 9606 8:56300010-56446734
GeneTranscriptPositionBiotype
ENSG00000170786 (SDR16C5)
short chain dehydrogenase/reductase family 16C, member 5 		ENST00000303749 (SDR16C5-001) 56301208-56320682 protein_coding
ENST00000396721 (SDR16C5-003) 56300010-56320175 protein_coding
ENST00000522671 (SDR16C5-002) 56301301-56320776 protein_coding
ENSG00000181195 (PENK)
proenkephalin 		ENST00000314922 (PENK-002) 56440954-56446030 protein_coding
ENST00000451791 (PENK-001) 56441272-56446734 protein_coding
ENST00000517415 (PENK-007) 56436674-56445944 protein_coding
ENST00000518770 (PENK-003) 56445245-56446663 protein_coding
ENST00000518974 (PENK-010) 56441759-56446572 protein_coding
ENST00000520589 (PENK-008) 56436715-56438510 processed_transcript
ENST00000521153 (PENK-004) 56446006-56446671 retained_intron
ENST00000523051 (PENK-005) 56443518-56446641 protein_coding
ENST00000523274 (PENK-006) 56441392-56445648 processed_transcript
ENSG00000253542 (SDR16C6P)
short chain dehydrogenase/reductase family 16C, member 6, pseudogene 		ENST00000517787 (SDR16C6P-001) 56374766-56390811 processed_transcript
ENST00000524136 (SDR16C6P-002) 56373064-56395365 unitary_pseudogene
ENSG00000254254 (RP11-17A4.2)
 ENST00000518662 (RP11-17A4.2-001) 56445807-56552067 antisense
ENST00000522511 (RP11-17A4.2-002) 56489098-56527136 antisense
CIL_0005LV_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000071019-ENSMUSG00000045573 CGP 10090 4:4055929-4138819
GeneTranscriptPositionBiotype
ENSMUSG00000045573 (Penk)
preproenkephalin 		ENSMUST00000070375 (Penk-001) 4133531-4138477 protein_coding
ENSMUST00000133567 (Penk-002) 4134112-4138819 protein_coding
ENSMUSG00000071019 (Sdr16c6)
short chain dehydrogenase/reductase family 16C, member 6 		ENSMUST00000095151 (Sdr16c6-201) 4055929-4076931 protein_coding
ENSMUST00000108383 (Sdr16c6-001) 4055931-4077522 protein_coding
ENSMUSG00000085996 (A830012C17Rik)
RIKEN cDNA A830012C17 gene 		ENSMUST00000131498 (A830012C17Rik-001) 4138321-4188703 processed_transcript
ENSMUSG00000094395 (Gm11807)
predicted gene 11807 		ENSMUST00000120575 (Gm11807-001) 4121500-4121946 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005LV_0001ENSDARG00000004869ENSDART00000142013ENSDARG00000016233ENSDART00000019392CIL_0005LV_0002ENSG00000170786ENST00000303749ENST00000396721ENST00000522671ENSG00000181195ENST00000314922ENST00000451791ENST00000517415ENST00000518770ENST00000518974ENST00000520589ENST00000521153ENST00000523051ENST00000523274ENSG00000253542ENST00000517787ENST00000524136ENSG00000254254ENST00000518662ENST00000522511CIL_0005LV_0003ENSMUSG00000045573ENSMUST00000070375ENSMUST00000133567ENSMUSG00000071019ENSMUST00000095151ENSMUST00000108383ENSMUSG00000085996ENSMUST00000131498ENSMUSG00000094395ENSMUST00000120575
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005LV_0001ENSDARG00000004869ENSDART00000142013ENSDARG00000016233ENSDART00000019392CIL_0005LV_0002ENSG00000170786ENST00000303749ENST00000396721ENST00000522671ENSG00000181195ENST00000314922ENST00000451791ENST00000523274ENSG00000253542ENST00000517787ENSG00000254254ENST00000518662CIL_0005LV_0003ENSMUSG00000045573ENSMUST00000070375ENSMUST00000133567ENSMUSG00000071019ENSMUST00000095151ENSMUST00000108383ENSMUSG00000085996ENSMUST00000131498ENSMUSG00000094395ENSMUST00000120575
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004869 ENSDART00000142013 N/A N/A N/A 53.072±10.15 N/A N/A 0.099±0.06 0.673±0.17 0.034±0.00 N/A 1.902±0.00 N/A N/A N/A
ENSDARG00000016233 ENSDART00000019392 N/A N/A N/A 2.824±2.22 N/A N/A 2.916±0.34 5.849±3.40 2.813±0.00 N/A 1.145±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000170786 ENST00000303749 0.073±0.00 N/A 0.032±0.00 1.194±0.00 0.265±0.02 0.298±0.12 N/A N/A 0.122±0.00 5.372±1.57 N/A 0.286±0.15 0.041±0.02 0.379±0.10
ENST00000396721 0.038±0.00 0.071±0.00 N/A 0.789±0.00 0.496±0.00 0.200±0.01 0.014±0.00 N/A N/A 0.892±0.13 N/A 0.229±0.15 N/A N/A
ENST00000522671 N/A N/A N/A N/A 0.148±0.00 N/A 0.013±0.00 0.007±0.00 N/A N/A 0.019±0.00 0.745±0.00 N/A 0.147±0.00
ENSG00000181195 ENST00000314922 N/A N/A N/A 2.491±0.46 4.830±0.00 11.249±0.00 0.076±0.00 N/A 0.508±0.00 4.958±0.00 N/A 3.461±2.44 2.009±1.11 33.386±14.68
ENST00000451791 N/A N/A N/A 2.506±0.00 N/A 9.609±0.00 N/A N/A N/A N/A N/A 3.886±0.00 4.274±0.00 51.764±20.42
ENST00000517415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.270±1.99 N/A N/A
ENSG00000253542 ENST00000517787 0.028±0.00 0.028±0.00 N/A 0.029±0.00 N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A
ENST00000524136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000254254 ENST00000518662 1.081±0.00 2.948±0.00 0.132±0.00 1.358±1.14 1.181±0.97 0.034±0.00 0.885±0.85 0.635±0.45 0.389±0.14 1.089±0.00 0.184±0.00 0.201±0.09 N/A N/A
ENST00000522511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000045573 ENSMUST00000070375 2.683±1.36 N/A 4.835±0.00 0.601±0.00 6.355±4.41 1.143±0.35 0.643±0.12 0.515±0.04 0.231±0.11 0.511±0.07 2.508±0.56 37.877±20.58 2.652±4.51 50.938±15.68
ENSMUST00000133567 16.086±0.70 27.294±10.70 8.112±0.03 11.392±5.34 31.774±13.89 10.617±2.18 2.139±1.10 2.129±0.46 0.303±0.21 3.793±0.54 0.951±0.12 67.736±18.80 5.912±9.87 38.603±23.44
ENSMUSG00000071019 ENSMUST00000095151 N/A N/A 0.178±0.04 0.021±0.00 0.649±0.20 0.118±0.04 N/A N/A 0.004±0.00 0.660±0.00 0.095±0.00 N/A 0.026±0.00 0.058±0.04
ENSMUST00000108383 N/A N/A 0.174±0.00 0.094±0.00 N/A N/A N/A N/A 0.005±0.00 N/A 0.086±0.00 N/A 0.009±0.00 N/A
ENSMUSG00000085996 ENSMUST00000131498 N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000094395 ENSMUST00000120575 0.531±0.39 0.680±0.24 0.158±0.00 0.113±0.00 0.257±0.13 1.499±0.52 0.351±0.11 0.150±0.05 0.143±0.11 1.077±0.32 0.088±0.00 0.577±0.14 0.108±0.06 0.190±0.00

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