C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dermatan sulfate epimerase-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000310045 DSEL-001 ENSG00000171451 9606 - 18:67506582-67516980 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000310045
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000310045 1.351±0.00 0.585±0.00 0.998±0.00 1.461±0.31 1.659±0.82 0.950±0.16 0.320±0.03 0.624±0.15 1.004±0.17 0.651±0.00 0.134±0.03 0.674±0.36 0.884±0.17 0.886±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ST CIL_0005ST_0001 CGP 18:66501083-67516980
CIL_0000B6 CIL_0000B6_0002 CGP 18:67506582-68715298

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005975 TAS carbohydrate metabolic process
GO:0008146 IEA sulfotransferase activity
GO:0016021 IEA integral component of membrane
GO:0016853 IEA isomerase activity
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0030204 TAS chondroitin sulfate metabolic process
GO:0030208 TAS dermatan sulfate biosynthetic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035462 Dsel-001 protein_coding Mus_musculus 0 4682
ENSMUST00000186365 Dsel-002 processed_transcript Mus_musculus 0 1666

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