C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005TF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000030390-ENSDARG00000052631 CGP 7955 5:54703094-54761286
GeneTranscriptPositionBiotype
ENSDARG00000030390 (mtx3)
metaxin 3 		ENSDART00000028251 (mtx3-201) 54703094-54721790 protein_coding
ENSDARG00000052631 (thbs4a)
thrombospondin 4a 		ENSDART00000051005 (thbs4a-201) 54728053-54761286 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0005TF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000177034-ENSG00000113296 CGP 9606 5:79976731-80083287
GeneTranscriptPositionBiotype
ENSG00000113296 (THBS4)
thrombospondin 4 		ENST00000350881 (THBS4-001) 80035348-80083287 protein_coding
ENST00000504720 (THBS4-004) 80078835-80083287 processed_transcript
ENST00000510218 (THBS4-006) 79991332-80055967 processed_transcript
ENST00000511733 (THBS4-005) 80036023-80083282 protein_coding
ENST00000511888 (THBS4-003) 80082004-80083188 processed_transcript
ENST00000513310 (THBS4-007) 79991311-80055906 processed_transcript
ENST00000515510 (THBS4-002) 80073272-80076879 processed_transcript
ENSG00000177034 (MTX3)
metaxin 3 		ENST00000509852 (MTX3-001) 79982900-79991259 protein_coding
ENST00000512528 (MTX3-005) 79983364-79991259 protein_coding
ENST00000512560 (MTX3-002) 79979761-79991245 protein_coding
ENST00000617335 (MTX3-201) 79976731-79991262 protein_coding
ENSG00000249825 (CTD-2201I18.1)
uncharacterized LOC101929215 		ENST00000503007 (CTD-2201I18.1-002) 80052374-80082404 antisense
ENST00000514042 (CTD-2201I18.1-001) 80066349-80083654 antisense
ENSG00000251050 (RP11-168A11.4)
 ENST00000505179 (RP11-168A11.4-001) 80019609-80019920 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TF_0001ENSDARG00000030390ENSDART00000028251ENSDARG00000052631ENSDART00000051005CIL_0005TF_0002ENSG00000113296ENST00000350881ENST00000504720ENST00000510218ENST00000511733ENST00000511888ENST00000513310ENST00000515510ENSG00000177034ENST00000509852ENST00000512528ENST00000512560ENST00000617335ENSG00000249825ENST00000503007ENST00000514042ENSG00000251050ENST00000505179
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TF_0001ENSDARG00000030390ENSDART00000028251ENSDARG00000052631ENSDART00000051005CIL_0005TF_0002ENSG00000113296ENST00000350881ENST00000504720ENST00000511733ENST00000515510ENSG00000177034ENST00000509852ENST00000512560ENST00000617335ENSG00000249825ENST00000503007ENST00000514042ENSG00000251050ENST00000505179
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000030390 ENSDART00000028251 N/A N/A N/A 0.953±0.51 N/A N/A 0.688±0.42 0.080±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000052631 ENSDART00000051005 N/A N/A N/A 1.343±0.82 N/A N/A 1.017±0.59 1.591±0.71 0.011±0.00 N/A 5.495±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113296 ENST00000350881 7.649±0.00 7.344±0.00 N/A 8.293±0.00 20.261±10.93 16.320±13.76 15.458±11.43 0.231±0.00 1.105±0.00 1.005±0.22 14.582±2.64 5.904±4.73 0.188±0.07 9.532±6.48
ENST00000504720 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.232±0.00 N/A N/A 0.236±0.00 N/A
ENST00000510218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511733 N/A N/A 0.016±0.00 1.984±0.00 4.263±0.00 0.809±0.00 N/A 0.064±0.00 N/A 0.236±0.00 N/A 0.825±0.00 N/A N/A
ENST00000511888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.197±0.00 N/A
ENSG00000177034 ENST00000509852 N/A N/A 2.368±0.00 3.073±0.00 2.956±0.00 2.724±0.00 1.537±0.00 0.931±0.00 4.615±0.00 3.104±0.00 0.968±0.00 2.522±0.00 N/A N/A
ENST00000512528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512560 N/A N/A N/A N/A N/A 0.773±0.00 0.532±0.00 N/A 1.265±0.00 0.583±0.00 0.132±0.00 N/A N/A N/A
ENST00000617335 1.073±0.00 1.947±0.00 N/A 0.947±0.00 1.453±0.00 0.850±0.00 0.267±0.00 1.049±0.52 0.378±0.00 0.428±0.00 0.556±0.00 1.475±0.53 0.593±0.24 0.801±0.39
ENSG00000249825 ENST00000503007 N/A N/A N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A N/A N/A N/A N/A
ENST00000514042 N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00 N/A N/A N/A 0.019±0.00 N/A
ENSG00000251050 ENST00000505179 N/A 0.408±0.00 3.277±0.00 0.998±0.52 N/A 0.237±0.00 0.093±0.00 0.301±0.00 N/A N/A N/A 1.602±0.72 0.146±0.00 0.288±0.01

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