C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thrombospondin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000511733 THBS4-005 ENSG00000113296 9606 + 5:80036023-80083282 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLungOvaryENST00000511733
Transcript ID Bladder Brain Breast Colon Kidney Lung Ovary
ENST00000511733 0.016±0.00 1.984±0.00 4.263±0.00 0.809±0.00 0.064±0.00 0.236±0.00 0.825±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TF CIL_0005TF_0002 CGP 5:79976731-80083287
CIL_0005TG CIL_0005TG_0002 CGP 5:79991311-80256079

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0007155 IEA cell adhesion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022213 Thbs4-001 protein_coding Mus_musculus 0 3245

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