C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005TH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000002816-ENSDARG00000039929 CGP 7955 5:53315188-53462234
GeneTranscriptPositionBiotype
ENSDARG00000002816 (rasgrf2b)
Ras protein-specific guanine nucleotide-releasing factor 2b 		ENSDART00000083350 (rasgrf2b-001) 53315188-53434604 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0005TH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000113319-ENSG00000131730 CGP 9606 5:80960672-81266397
GeneTranscriptPositionBiotype
ENSG00000113319 (RASGRF2)
Ras protein-specific guanine nucleotide-releasing factor 2 		ENST00000265080 (RASGRF2-001) 80960672-81230156 protein_coding
ENST00000502677 (RASGRF2-005) 81070024-81088564 processed_transcript
ENST00000503795 (RASGRF2-002) 80960689-81225812 nonsense_mediated_decay
ENST00000512186 (RASGRF2-004) 81092916-81096506 processed_transcript
ENST00000514946 (RASGRF2-006) 81019407-81073222 processed_transcript
ENSG00000131730 (CKMT2)
creatine kinase, mitochondrial 2 (sarcomeric) 		ENST00000254035 (CKMT2-001) 81233285-81266397 protein_coding
ENST00000424301 (CKMT2-003) 81233324-81266397 protein_coding
ENST00000437669 (CKMT2-201) 81233320-81266395 protein_coding
ENST00000505060 (CKMT2-007) 81233325-81256940 protein_coding
ENST00000505135 (CKMT2-011) 81252733-81257923 retained_intron
ENST00000505704 (CKMT2-009) 81233339-81252286 processed_transcript
ENST00000505850 (CKMT2-010) 81254983-81259384 retained_intron
ENST00000511719 (CKMT2-004) 81233320-81255057 protein_coding
ENST00000513094 (CKMT2-005) 81233324-81254974 processed_transcript
ENST00000514086 (CKMT2-013) 81254581-81266396 retained_intron
ENST00000515238 (CKMT2-008) 81233326-81254547 retained_intron
ENST00000515615 (CKMT2-006) 81233324-81255040 processed_transcript
ENSG00000247572 (CKMT2-AS1)
CKMT2 antisense RNA 1 		ENST00000500148 (CKMT2-AS1-002) 81237565-81301544 antisense
ENST00000501927 (CKMT2-AS1-003) 81237828-81301555 antisense
ENST00000502041 (CKMT2-AS1-004) 81237565-81301559 antisense
ENST00000503483 (CKMT2-AS1-001) 81204084-81301485 antisense
ENST00000505295 (CKMT2-AS1-005) 81244858-81301560 antisense
ENST00000511495 (CKMT2-AS1-007) 81210101-81301497 antisense
ENST00000512287 (CKMT2-AS1-006) 81235759-81301523 antisense
ENSG00000248794 (CTD-2248H3.1)
 ENST00000510537 (CTD-2248H3.1-001) 81242330-81242599 processed_pseudogene
ENSG00000251001 (CTD-2193P3.1)
 ENST00000506228 (CTD-2193P3.1-001) 80997183-80998047 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TH_0001ENSDARG00000002816ENSDART00000083350CIL_0005TH_0002ENSG00000113319ENST00000265080ENST00000502677ENST00000503795ENST00000512186ENST00000514946ENSG00000131730ENST00000254035ENST00000424301ENST00000437669ENST00000505060ENST00000505135ENST00000505704ENST00000505850ENST00000511719ENST00000513094ENST00000514086ENST00000515238ENST00000515615ENSG00000247572ENST00000500148ENST00000501927ENST00000502041ENST00000503483ENST00000505295ENST00000511495ENST00000512287ENSG00000248794ENST00000510537ENSG00000251001ENST00000506228
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TH_0001ENSDARG00000002816ENSDART00000083350CIL_0005TH_0002ENSG00000113319ENST00000265080ENST00000502677ENST00000503795ENSG00000131730ENST00000254035ENST00000424301ENST00000437669ENST00000505060ENST00000505135ENST00000505850ENST00000511719ENSG00000247572ENST00000500148ENST00000501927ENST00000502041ENSG00000248794ENST00000510537ENSG00000251001ENST00000506228
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002816 ENSDART00000083350 N/A N/A N/A N/A N/A N/A 0.150±0.14 0.549±0.35 N/A N/A 0.141±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113319 ENST00000265080 5.264±0.00 0.789±0.00 N/A 11.708±0.00 6.330±0.00 1.026±0.76 0.787±0.33 0.295±0.00 0.197±0.10 1.413±0.90 0.455±0.00 1.311±0.85 2.750±0.56 0.358±0.00
ENST00000502677 N/A N/A N/A N/A 2.868±1.81 N/A N/A 0.155±0.00 N/A 3.106±0.00 N/A 1.855±0.77 N/A N/A
ENST00000503795 N/A N/A 1.407±0.00 N/A N/A N/A 0.570±0.00 0.082±0.00 0.432±0.00 N/A N/A N/A N/A N/A
ENST00000512186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000131730 ENST00000254035 0.966±0.00 3.159±0.00 0.422±0.00 0.953±0.33 9.744±0.00 0.757±0.00 129.832±90.62 2.306±0.00 N/A N/A 53.183±12.19 2.148±0.83 1.261±0.00 3.244±0.00
ENST00000424301 N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A N/A
ENST00000437669 N/A 3.228±0.00 N/A N/A 3.567±0.00 1.116±0.00 160.942±118.06 8.605±0.00 N/A N/A 69.856±19.81 2.483±0.91 0.981±0.43 5.663±0.00
ENST00000505060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.337±0.00 N/A N/A
ENST00000505135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.632±0.00
ENST00000505704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505850 N/A N/A 1.114±0.00 1.156±0.00 N/A N/A N/A N/A 0.187±0.00 N/A N/A 0.618±0.00 1.332±0.00 N/A
ENST00000511719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.539±0.00 N/A
ENST00000513094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000247572 ENST00000500148 N/A N/A N/A N/A N/A N/A N/A N/A 0.601±0.00 N/A N/A N/A N/A 1.519±0.00
ENST00000501927 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.014±0.00 N/A N/A N/A 1.055±0.00
ENST00000502041 N/A 1.731±0.00 N/A N/A N/A 2.376±0.00 0.783±0.00 1.152±0.28 0.722±0.42 N/A 1.415±0.00 3.557±1.56 N/A 2.030±0.32
ENST00000503483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000248794 ENST00000510537 0.262±0.00 0.368±0.00 4.021±0.00 0.600±0.44 0.472±0.00 1.308±1.26 0.731±0.68 1.941±1.68 0.144±0.00 0.646±0.00 1.484±0.80 1.208±0.80 0.106±0.00 0.389±0.29
ENSG00000251001 ENST00000506228 N/A 0.037±0.00 N/A N/A 0.118±0.00 N/A 0.255±0.00 N/A N/A N/A N/A 0.158±0.13 N/A N/A

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