C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ras protein-specific guanine nucleotide-releasing factor 2b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000083350 rasgrf2b-001 ENSDARG00000002816 7955 + 5:53315188-53434604 protein_coding

Danio rerio EnsemblZv9

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Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyMuscleENSDART00000083350
Transcript ID Heart Kidney Muscle
ENSDART00000083350 0.150±0.14 0.549±0.35 0.141±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TH CIL_0005TH_0001 CGP 5:53315188-53462234

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005515 IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005622 IEA intracellular
GO:0005737 IEA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005789 IEA endoplasmic reticulum membrane
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction
GO:0016020 IEA membrane
GO:0035023 IEA regulation of Rho protein signal transduction
GO:0051056 IEA regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265080 RASGRF2-001 protein_coding Homo_sapiens 0 712
ENST00000503795 RASGRF2-002 nonsense_mediated_decay Homo_sapiens 0 516

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