C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005TZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000241399-ENSG00000248672 CGP 9606 2:159768630-159904710
GeneTranscriptPositionBiotype
ENSG00000054219 (LY75)
lymphocyte antigen 75
ENST00000263636 (LY75-001) 159803355-159904710 protein_coding
ENST00000471164 (LY75-006) 159902549-159904649 processed_transcript
ENST00000484559 (LY75-004) 159871819-159904742 retained_intron
ENST00000492955 (LY75-007) 159902365-159904749 processed_transcript
ENSG00000227055 (AC009961.5)
ENST00000435771 (AC009961.5-001) 159812234-159814009 processed_pseudogene
ENSG00000241399 (CD302)
CD302 molecule
ENST00000259053 (CD302-001) 159768853-159798242 protein_coding
ENST00000429078 (CD302-201) 159768630-159798255 protein_coding
ENST00000480212 (CD302-002) 159768853-159798242 processed_transcript
ENST00000553424 (CD302-202) 159768630-159798255 protein_coding
ENSG00000248672 (LY75-CD302)
LY75-CD302 readthrough
ENST00000504764 (LY75-CD302-001) 159771851-159904710 protein_coding
ENST00000505052 (LY75-CD302-002) 159771851-159904710 protein_coding
CIL_0005TZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000060703-ENSMUSG00000026980 CGP 10090 2:60251993-60383303
GeneTranscriptPositionBiotype
ENSMUSG00000026980 (Ly75)
lymphocyte antigen 75
ENSMUST00000028362 (Ly75-201) 60293760-60383231 protein_coding
ENSMUST00000112533 (Ly75-001) 60292103-60383303 protein_coding
ENSMUSG00000060703 (Cd302)
CD302 antigen
ENSMUST00000028356 (Cd302-002) 60251993-60284418 protein_coding
ENSMUST00000074606 (Cd302-001) 60251993-60284488 protein_coding
ENSMUSG00000080198 (Gm13573)
predicted gene 13573
ENSMUST00000116410 (Gm13573-001) 60274944-60275574 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TZ_0001ENSG00000054219ENST00000263636ENST00000471164ENST00000484559ENST00000492955ENSG00000227055ENST00000435771ENSG00000241399ENST00000259053ENST00000429078ENST00000480212ENST00000553424ENSG00000248672ENST00000504764ENST00000505052CIL_0005TZ_0002ENSMUSG00000026980ENSMUST00000028362ENSMUST00000112533ENSMUSG00000060703ENSMUST00000028356ENSMUST00000074606ENSMUSG00000080198ENSMUST00000116410
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TZ_0001ENSG00000054219ENST00000263636ENSG00000227055ENST00000435771ENSG00000241399ENST00000259053ENST00000429078ENST00000553424ENSG00000248672ENST00000504764CIL_0005TZ_0002ENSMUSG00000026980ENSMUST00000028362ENSMUST00000112533ENSMUSG00000060703ENSMUST00000028356ENSMUST00000074606ENSMUSG00000080198ENSMUST00000116410
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000054219 ENST00000263636 N/A 4.098±0.00 N/A N/A 2.519±0.00 1.816±0.00 N/A N/A N/A 3.110±0.00 N/A 5.147±0.71 N/A N/A
ENST00000471164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000227055 ENST00000435771 N/A 0.086±0.00 N/A N/A 0.119±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000241399 ENST00000259053 17.613±0.00 5.484±0.00 N/A 3.644±0.00 7.934±0.39 13.781±0.00 3.763±1.99 17.830±9.04 22.138±13.43 16.052±1.91 N/A 6.744±1.55 3.474±0.87 7.550±2.70
ENST00000429078 N/A N/A N/A 2.881±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553424 11.425±0.00 5.901±0.00 2.809±0.00 3.261±0.00 5.306±1.23 6.798±2.49 2.145±0.76 14.730±9.33 14.492±8.03 9.178±0.00 N/A 9.452±1.97 2.152±0.02 10.342±0.00
ENSG00000248672 ENST00000504764 N/A N/A N/A N/A N/A 2.171±0.00 N/A N/A N/A 5.089±0.00 N/A 5.940±0.00 N/A N/A
ENST00000505052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026980 ENSMUST00000028362 N/A N/A N/A 0.098±0.00 0.585±0.00 N/A N/A N/A N/A N/A N/A 0.264±0.08 N/A 0.141±0.06
ENSMUST00000112533 N/A 0.131±0.02 0.113±0.00 0.179±0.00 N/A 0.299±0.00 N/A 0.212±0.00 0.431±0.21 N/A 0.019±0.01 0.518±0.21 1.134±0.12 0.179±0.01
ENSMUSG00000060703 ENSMUST00000028356 9.266±0.00 6.863±2.91 N/A N/A 4.841±1.48 2.750±0.91 N/A N/A N/A 7.735±0.56 0.581±0.00 14.683±4.81 1.045±0.05 2.388±0.00
ENSMUST00000074606 47.067±20.40 7.502±0.86 13.609±0.10 3.500±2.70 22.128±4.00 2.100±1.05 4.978±0.85 25.211±1.80 86.134±53.89 16.521±1.00 3.184±0.42 10.792±9.47 2.750±3.54 4.809±0.60
ENSMUSG00000080198 ENSMUST00000116410 0.144±0.05 0.098±0.00 0.210±0.00 4.389±6.11 N/A N/A N/A 0.125±0.00 0.328±0.17 0.139±0.08 0.288±0.13 0.894±0.16 0.505±0.52 1.015±1.26

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