C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lymphocyte antigen 75
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112533 Ly75-001 ENSMUSG00000026980 10090 - 2:60292103-60383303 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000112533
Transcript ID Adrenal Bladder Brain Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000112533 0.131±0.02 0.113±0.00 0.179±0.00 0.299±0.00 0.212±0.00 0.431±0.21 0.019±0.01 0.518±0.21 1.134±0.12 0.179±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TZ CIL_0005TZ_0002 CGP 2:60251993-60383303
CIL_0005TY CIL_0005TY_0002 CGP 2:60292103-60553308

Gene Ontology

GO IDEvidence TypeGO Description
GO:0009897 IDA external side of plasma membrane
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263636 LY75-001 protein_coding Homo_sapiens 0 4139
ENST00000484559 LY75-004 retained_intron Homo_sapiens 0 1851
ENST00000504764 LY75-CD302-001 protein_coding Homo_sapiens 0 4076
ENST00000505052 LY75-CD302-002 protein_coding Homo_sapiens 0 3930

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