C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lymphocyte antigen 75
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263636 LY75-001 ENSG00000054219 9606 - 2:159803355-159904710 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLungOvaryENST00000263636
Transcript ID Adrenal Breast Colon Lung Ovary
ENST00000263636 4.098±0.00 2.519±0.00 1.816±0.00 3.110±0.00 5.147±0.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TZ CIL_0005TZ_0001 CGP 2:159768630-159904710
CIL_0005TY CIL_0005TY_0001 CGP 2:159803355-160062610

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 TAS receptor activity
GO:0005887 TAS integral component of plasma membrane
GO:0006897 IEA endocytosis
GO:0006954 TAS inflammatory response
GO:0006955 TAS immune response
GO:0030246 IEA carbohydrate binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112533 Ly75-001 protein_coding Mus_musculus 0 4139
ENSMUST00000028362 Ly75-201 protein_coding Mus_musculus 0 4124
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000003 60
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00001 58

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