C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005W0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000114739-ENSG00000157036 CGP 9606 3:38453851-38542161
GeneTranscriptPositionBiotype
ENSG00000114739 (ACVR2B)
activin A receptor, type IIB 		ENST00000352511 (ACVR2B-001) 38453851-38493142 protein_coding
ENST00000461232 (ACVR2B-003) 38473446-38483374 retained_intron
ENST00000465020 (ACVR2B-002) 38454319-38483373 retained_intron
ENSG00000157036 (EXOG)
endo/exonuclease (5'-3'), endonuclease G-like 		ENST00000287675 (EXOG-001) 38496272-38525951 protein_coding
ENST00000412107 (EXOG-003) 38496127-38524413 nonsense_mediated_decay
ENST00000422077 (EXOG-008) 38496345-38524699 protein_coding
ENST00000431472 (EXOG-007) 38496342-38524417 nonsense_mediated_decay
ENST00000436414 (EXOG-002) 38496272-38524868 nonsense_mediated_decay
ENST00000438992 (EXOG-004) 38496365-38524568 nonsense_mediated_decay
ENST00000443942 (EXOG-013) 38496340-38501502 nonsense_mediated_decay
ENST00000447573 (EXOG-009) 38496343-38524818 nonsense_mediated_decay
ENST00000450732 (EXOG-015) 38496485-38524060 nonsense_mediated_decay
ENST00000453767 (EXOG-016) 38496481-38523216 protein_coding
ENST00000454803 (EXOG-005) 38496345-38524950 nonsense_mediated_decay
ENST00000457367 (EXOG-006) 38496365-38525121 nonsense_mediated_decay
ENST00000470291 (EXOG-014) 38496492-38513851 nonsense_mediated_decay
ENST00000474071 (EXOG-010) 38496738-38542161 retained_intron
ENST00000483749 (EXOG-017) 38501162-38524246 retained_intron
ENST00000489813 (EXOG-012) 38496345-38498022 retained_intron
ENSG00000229589 (ACVR2B-AS1)
ACVR2B antisense RNA 1 		ENST00000441531 (ACVR2B-AS1-001) 38451027-38454820 antisense
ENSG00000230683 (DDTP1)
D-dopachrome tautomerase pseudogene 1 		ENST00000443589 (DDTP1-001) 38515448-38515830 processed_pseudogene
ENSG00000232439 (RPL18AP7)
ribosomal protein L18a pseudogene 7 		ENST00000435924 (RPL18AP7-001) 38526802-38527325 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0005W0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000061393-ENSMUSG00000042787 CGP 10090 9:119402444-119465517
GeneTranscriptPositionBiotype
ENSMUSG00000042787 (Exog)
endo/exonuclease (5'-3'), endonuclease G-like 		ENSMUST00000035094 (Exog-201) 119444923-119465517 protein_coding
ENSMUST00000164213 (Exog-202) 119444951-119464230 protein_coding
ENSMUSG00000061393 (Acvr2b)
activin receptor IIB 		ENSMUST00000035093 (Acvr2b-201) 119402444-119433501 protein_coding
ENSMUST00000165044 (Acvr2b-202) 119402501-119433501 protein_coding
ENSMUSG00000097504 (4930516B21Rik)
RIKEN cDNA 4930516B21 gene 		ENSMUST00000181600 (4930516B21Rik-201) 119440278-119444830 lincRNA

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005W0_0001ENSG00000114739ENST00000352511ENST00000461232ENST00000465020ENSG00000157036ENST00000287675ENST00000412107ENST00000422077ENST00000431472ENST00000436414ENST00000438992ENST00000443942ENST00000447573ENST00000450732ENST00000453767ENST00000454803ENST00000457367ENST00000470291ENST00000474071ENST00000483749ENST00000489813ENSG00000229589ENST00000441531ENSG00000230683ENST00000443589ENSG00000232439ENST00000435924CIL_0005W0_0002ENSMUSG00000042787ENSMUST00000035094ENSMUST00000164213ENSMUSG00000061393ENSMUST00000035093ENSMUST00000165044ENSMUSG00000097504ENSMUST00000181600
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005W0_0001ENSG00000114739ENST00000352511ENST00000465020ENSG00000157036ENST00000287675ENST00000422077ENST00000431472ENST00000436414ENST00000438992ENST00000447573ENST00000457367ENST00000483749ENSG00000229589ENST00000441531ENSG00000230683ENST00000443589ENSG00000232439ENST00000435924CIL_0005W0_0002ENSMUSG00000042787ENSMUST00000035094ENSMUST00000164213ENSMUSG00000061393ENSMUST00000035093ENSMUST00000165044ENSMUSG00000097504ENSMUST00000181600
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114739 ENST00000352511 1.027±0.00 0.346±0.00 N/A 0.646±0.50 0.950±0.28 0.636±0.00 0.436±0.27 0.446±0.34 0.710±0.05 0.458±0.30 1.044±0.72 0.868±0.41 1.076±0.48 2.298±0.38
ENST00000461232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.019±0.00 N/A N/A N/A
ENSG00000157036 ENST00000287675 0.803±0.00 N/A N/A 0.548±0.28 0.860±0.22 0.528±0.00 4.864±0.00 0.885±0.77 1.319±0.00 0.860±0.00 N/A 1.223±0.41 1.148±0.35 1.677±0.17
ENST00000412107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422077 N/A N/A N/A N/A 1.592±0.00 N/A N/A 0.952±0.00 0.304±0.00 N/A 1.384±0.00 N/A N/A N/A
ENST00000431472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.251±0.00 N/A N/A
ENST00000436414 N/A N/A 0.742±0.00 1.077±0.00 N/A 0.756±0.00 1.345±0.00 N/A N/A 3.622±0.00 N/A N/A N/A N/A
ENST00000438992 N/A N/A N/A N/A N/A N/A N/A N/A 0.115±0.00 N/A N/A N/A N/A N/A
ENST00000443942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447573 N/A N/A 0.635±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.350±0.00 N/A N/A
ENST00000450732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457367 N/A 1.222±0.00 N/A 1.134±0.00 N/A 0.267±0.00 3.506±0.00 0.532±0.00 0.125±0.00 N/A N/A N/A 0.579±0.07 1.308±0.00
ENST00000470291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483749 N/A N/A N/A N/A N/A N/A N/A 0.343±0.00 N/A N/A 0.552±0.00 N/A N/A N/A
ENST00000489813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000229589 ENST00000441531 0.634±0.00 0.373±0.00 0.155±0.00 0.368±0.18 0.639±0.01 0.491±0.22 0.242±0.10 0.112±0.00 0.517±0.35 0.225±0.06 1.525±1.19 0.476±0.39 0.154±0.04 0.526±0.04
ENSG00000230683 ENST00000443589 N/A N/A N/A 0.313±0.00 0.290±0.00 0.156±0.00 0.126±0.02 N/A N/A 0.700±0.00 N/A N/A N/A 0.109±0.05
ENSG00000232439 ENST00000435924 0.461±0.00 0.978±0.00 0.557±0.00 N/A 0.381±0.00 0.043±0.00 0.155±0.09 0.046±0.00 N/A N/A N/A 0.278±0.17 0.147±0.00 0.231±0.19
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042787 ENSMUST00000035094 0.384±0.14 0.490±0.12 0.302±0.03 3.247±1.58 0.284±0.14 0.304±0.10 0.181±0.07 0.215±0.07 0.304±0.17 0.472±0.15 0.156±0.05 0.677±0.26 0.514±0.22 0.320±0.06
ENSMUST00000164213 2.330±0.43 1.001±0.18 1.494±0.08 3.903±0.46 1.743±0.58 1.438±0.34 0.457±0.12 0.749±0.10 1.055±0.68 1.172±0.11 0.646±0.19 2.072±0.50 3.186±1.01 1.356±0.51
ENSMUSG00000061393 ENSMUST00000035093 0.874±0.00 0.519±0.10 N/A 2.483±0.00 0.461±0.33 1.081±0.41 0.386±0.07 0.855±0.42 0.272±0.16 0.786±0.00 0.690±0.00 1.846±0.71 N/A 0.240±0.00
ENSMUST00000165044 0.573±0.21 0.817±0.00 N/A 3.799±1.72 0.828±0.52 0.818±0.29 0.601±0.14 0.415±0.03 0.541±0.19 0.966±0.31 1.650±0.00 1.824±1.05 14.681±0.00 0.506±0.12
ENSMUSG00000097504 ENSMUST00000181600 N/A 0.934±0.35 1.995±0.00 0.826±0.00 0.654±0.33 0.965±0.58 N/A 0.292±0.00 0.348±0.10 N/A N/A 2.099±0.55 N/A 1.292±0.54

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