C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5292
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000073317 Gm5292-001 ENSMUSG00000059565 10090 - 5:43943902-43944483 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000073317
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000073317 0.229±0.05 0.160±0.00 0.068±0.01 0.044±0.03 0.164±0.00 0.372±0.32 0.077±0.00 0.078±0.00 0.032±0.02 0.089±0.00 0.395±0.35 0.137±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WP CIL_0005WP_0002 CGP 5:43868809-43981762

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307839 RPL15-001 protein_coding Homo_sapiens 0 610
ENST00000354811 RPL15-007 protein_coding Homo_sapiens 0 610
ENST00000391491 RPL15P3-001 processed_pseudogene Homo_sapiens 0 599
ENST00000412097 RPL15-011 protein_coding Homo_sapiens 0 593
ENST00000413699 RPL15-002 protein_coding Homo_sapiens 0 610
ENST00000414329 RP11-106M7.4-001 processed_pseudogene Homo_sapiens 0 429
ENST00000415719 RPL15-013 protein_coding Homo_sapiens 0 610
ENST00000416278 RP11-570G20.1-001 processed_pseudogene Homo_sapiens 0 401
ENST00000422218 RPL15-009 protein_coding Homo_sapiens 0 464
ENST00000422772 AC093107.7-001 processed_pseudogene Homo_sapiens 0 499
ENST00000422915 RP1-40G4P.1-001 processed_pseudogene Homo_sapiens 0 329
ENST00000429515 AC097523.1-001 processed_pseudogene Homo_sapiens 0 385
ENST00000432924 RPL15P18-001 processed_pseudogene Homo_sapiens 0 527
ENST00000434031 RPL15-014 protein_coding Homo_sapiens 0 610
ENST00000435882 RPL15-005 protein_coding Homo_sapiens 0 610
ENST00000436146 RPL15-008 nonsense_mediated_decay Homo_sapiens 0 564
ENST00000439829 AP002381.2-001 processed_pseudogene Homo_sapiens 0 477
ENST00000439981 RPL15P1-001 processed_pseudogene Homo_sapiens 0 357
ENST00000456530 RPL15-201 protein_coding Homo_sapiens 0 401
ENST00000465786 RPL15-006 retained_intron Homo_sapiens 0 274
ENST00000475247 RP11-214O14.1-001 processed_pseudogene Homo_sapiens 0 383
ENST00000475768 AP000797.1-001 processed_pseudogene Homo_sapiens 0 398
ENST00000477936 RP11-113C12.2-001 processed_pseudogene Homo_sapiens 0 472
ENST00000482912 RPL15P20-001 processed_pseudogene Homo_sapiens 0 455
ENST00000487352 RP11-100N21.1-001 processed_pseudogene Homo_sapiens 0 556
ENST00000490223 RPL15-004 retained_intron Homo_sapiens 0 405
ENST00000490252 RPL15P2-001 processed_pseudogene Homo_sapiens 0 473
ENST00000560630 RP11-325E5.4-001 processed_pseudogene Homo_sapiens 0 267
ENST00000567709 RP11-151H2.3-001 processed_pseudogene Homo_sapiens 0 243
ENST00000611050 RPL15-202 protein_coding Homo_sapiens 0 610

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