C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005XF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000111860-ENSG00000111860 CGP 9606 6:118460772-118710075
GeneTranscriptPositionBiotype
ENSG00000169075 (BRD7P3)
bromodomain containing 7 pseudogene 3
ENST00000469424 (BRD7P3-001) 118501430-118502906 processed_pseudogene
ENSG00000198523 (PLN)
phospholamban
ENST00000357525 (PLN-001) 118548298-118560730 protein_coding
ENSG00000217330 (SSXP10)
SSX family pseudogene 10
ENST00000402595 (SSXP10-001) 118589070-118589634 processed_pseudogene
CIL_0005XF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038594-ENSMUSG00000038594 CGP 10090 10:53278081-53379851
GeneTranscriptPositionBiotype
ENSMUSG00000038583 (Pln)
phospholamban
ENSMUST00000046221 (Pln-201) 53337686-53345999 protein_coding
ENSMUST00000163319 (Pln-202) 53337686-53345999 protein_coding
ENSMUSG00000038594 (Cep85l)
centrosomal protein 85-like
ENSMUST00000095691 (Cep85l-201) 53278081-53379851 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005XF_0001ENSG00000169075ENST00000469424ENSG00000198523ENST00000357525ENSG00000217330ENST00000402595CIL_0005XF_0002ENSMUSG00000038583ENSMUST00000046221ENSMUST00000163319ENSMUSG00000038594ENSMUST00000095691
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005XF_0001ENSG00000169075ENST00000469424ENSG00000198523ENST00000357525ENSG00000217330ENST00000402595CIL_0005XF_0002ENSMUSG00000038583ENSMUST00000046221ENSMUST00000163319ENSMUSG00000038594ENSMUST00000095691
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000169075 ENST00000469424 0.098±0.00 0.032±0.00 0.021±0.00 0.060±0.02 0.272±0.00 0.095±0.00 0.068±0.03 0.022±0.00 0.310±0.00 0.242±0.13 0.007±0.00 0.028±0.01 N/A 0.249±0.07
ENSG00000198523 ENST00000357525 3.372±0.00 15.801±0.00 2.574±0.00 0.973±0.00 8.155±3.91 35.497±14.77 494.520±36.55 2.750±2.54 17.339±17.06 10.127±0.20 57.310±4.37 2.501±2.02 0.521±0.64 7.437±6.64
ENSG00000217330 ENST00000402595 N/A 0.140±0.00 N/A 0.024±0.00 N/A 0.193±0.00 0.076±0.03 N/A 0.823±0.00 0.160±0.00 0.563±0.00 0.192±0.16 N/A 0.144±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038583 ENSMUST00000046221 2.559±1.72 0.274±0.07 2.569±0.42 0.090±0.04 0.469±0.18 6.712±1.09 1377.355±313.87 1.543±0.57 0.076±0.06 6.869±0.91 0.582±0.28 2.301±1.08 0.148±0.23 12.802±6.31
ENSMUST00000163319 N/A N/A N/A N/A N/A N/A N/A 0.228±0.00 N/A 0.730±0.00 0.146±0.03 0.767±0.00 N/A N/A
ENSMUSG00000038594 ENSMUST00000095691 1.704±0.53 8.990±0.82 N/A N/A 2.219±1.19 1.343±0.38 0.998±0.65 1.103±0.40 2.150±1.18 1.288±0.21 N/A 4.113±1.88 1.906±0.54 78.070±55.16

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