C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholamban
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046221 Pln-201 ENSMUSG00000038583 10090 + 10:53337686-53345999 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046221
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046221 2.559±1.72 0.274±0.07 2.569±0.42 0.090±0.04 0.469±0.18 6.712±1.09 1377.355±313.87 1.543±0.57 0.076±0.06 6.869±0.91 0.582±0.28 2.301±1.08 0.148±0.23 12.802±6.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005XE CIL_0005XE_0002 CGP 10:52690533-53379851
CIL_000991 CIL_000991_0002 VISTA 10:53043568-53644849
CIL_0005XF CIL_0005XF_0002 CGP 10:53278081-53379851

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002026 IGI regulation of the force of heart contraction
GO:0005246 IEA calcium channel regulator activity
GO:0005515 IPI protein binding
GO:0006874 IGI cellular calcium ion homeostasis
GO:0008016 IMP regulation of heart contraction
GO:0010880 IMP regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum
GO:0010881 IMP regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion
GO:0016529 IDA sarcoplasmic reticulum
GO:0045822 IGI negative regulation of heart contraction
GO:0048738 IGI cardiac muscle tissue development
GO:0051924 ISS regulation of calcium ion transport
GO:0060314 IMP regulation of ryanodine-sensitive calcium-release channel activity
GO:0086004 IMP regulation of cardiac muscle cell contraction
GO:0086023 IMP adrenergic receptor signaling pathway involved in heart process
GO:0086092 IMP regulation of the force of heart contraction by cardiac conduction
GO:0090279 IMP regulation of calcium ion import
GO:1901077 IMP regulation of relaxation of muscle

Homologs

No Homologs available.

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