C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adhesion molecule with Ig like domain 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000053106 Amigo2-201 ENSMUSG00000048218 10090 - 15:97244074-97247287 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053106
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053106 2.284±0.00 2.093±0.80 1.269±0.42 1.465±0.00 0.324±0.04 0.553±0.13 0.529±0.10 0.621±0.25 3.171±0.05 0.421±0.12 2.485±0.68 1.335±0.47 0.802±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YP CIL_0005YP_0002 CGP 15:96994823-97247287
CIL_0005YQ CIL_0005YQ_0002 CGP 15:97244074-97385689

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005886 IEA plasma membrane
GO:0007155 ISO cell adhesion
GO:0007156 ISS homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007157 ISS heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0016021 ISO integral component of membrane
GO:0043066 IEA negative regulation of apoptotic process
GO:0043069 ISS negative regulation of programmed cell death

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266581 AMIGO2-003 protein_coding Homo_sapiens 0 1511
ENST00000429635 AMIGO2-001 protein_coding Homo_sapiens 0 1511
ENST00000550413 AMIGO2-002 protein_coding Homo_sapiens 0 1511

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