C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00061W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000058306-ENSDARG00000042249 CGP 7955 18:7866732-8119764
GeneTranscriptPositionBiotype
ENSDARG00000042249 (FRMD4A)
FERM domain containing 4A 		ENSDART00000093131 (FRMD4A-201) 7959828-8119764 protein_coding
ENSDART00000147284 (FRMD4A-001) 7967973-8044510 protein_coding
ENSDARG00000058306 (prpf18)
PRP18 pre-mRNA processing factor 18 homolog (yeast) 		ENSDART00000081154 (prpf18-001) 7866732-7873121 protein_coding
CIL_00061W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000239665-ENSG00000151474 CGP 9606 10:13610047-14462142
GeneTranscriptPositionBiotype
ENSG00000165630 (PRPF18)
pre-mRNA processing factor 18 		ENST00000320054 (PRPF18-002) 13586968-13611652 protein_coding
ENST00000378572 (PRPF18-001) 13586927-13630868 protein_coding
ENST00000417658 (PRPF18-003) 13586939-13614060 protein_coding
ENSG00000199407 (RNA5SP301)
RNA, 5S ribosomal pseudogene 301 		ENST00000362537 (RNA5SP301-201) 13727796-13727916 rRNA
ENSG00000215227 (NUTF2P5)
nuclear transport factor 2 pseudogene 5 		ENST00000475013 (NUTF2P5-001) 13870797-13871175 processed_pseudogene
ENSG00000222235 (AL157392.1)
 ENST00000410303 (AL157392.1-201) 13704978-13705072 miRNA
ENSG00000225112 (RP11-295P9.6)
 ENST00000412388 (RP11-295P9.6-001) 13710415-13712054 antisense
ENSG00000229751 (RP11-142M10.2)
 ENST00000446193 (RP11-142M10.2-001) 13991815-14007526 antisense
ENSG00000234091 (RP11-353M9.1)
 ENST00000449462 (RP11-353M9.1-001) 13729383-13756200 antisense
ENSG00000268549 (RP11-295P9.8)
 ENST00000600850 (RP11-295P9.8-001) 13682521-13684874 antisense
ENSG00000273474 (RP11-295P9.12)
 ENST00000609756 (RP11-295P9.12-001) 13675646-13675990 antisense
ENSG00000278100 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000612546 (Metazoa_SRP.1-460) 14391875-14392196 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00061W_0001ENSDARG00000042249ENSDART00000093131ENSDART00000147284ENSDARG00000058306ENSDART00000081154CIL_00061W_0002ENSG00000165630ENST00000320054ENST00000378572ENST00000417658ENSG00000199407ENST00000362537ENSG00000215227ENST00000475013ENSG00000222235ENST00000410303ENSG00000225112ENST00000412388ENSG00000229751ENST00000446193ENSG00000234091ENST00000449462ENSG00000268549ENST00000600850ENSG00000273474ENST00000609756ENSG00000278100ENST00000612546
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00061W_0001ENSDARG00000042249ENSDART00000093131ENSDARG00000058306ENSDART00000081154CIL_00061W_0002ENSG00000165630ENST00000320054ENST00000378572ENST00000417658ENSG00000199407ENST00000362537ENSG00000215227ENST00000475013ENSG00000222235ENST00000410303ENSG00000225112ENST00000412388ENSG00000229751ENST00000446193ENSG00000234091ENST00000449462ENSG00000268549ENST00000600850ENSG00000273474ENST00000609756ENSG00000278100ENST00000612546
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000042249 ENSDART00000093131 N/A N/A N/A 8.119±6.18 N/A N/A 1.554±0.64 0.596±0.11 0.078±0.00 N/A 0.443±0.00 N/A N/A N/A
ENSDART00000147284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000058306 ENSDART00000081154 N/A N/A N/A 8.226±4.34 N/A N/A 9.246±4.40 6.124±5.77 0.992±0.00 N/A 6.598±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165630 ENST00000320054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.466±10.00 26.048±0.00 52.525±0.00
ENST00000378572 10.231±0.00 9.917±0.00 N/A N/A 10.904±0.00 7.008±3.16 4.950±0.95 7.816±4.47 7.476±1.91 4.726±0.00 3.718±0.00 11.051±3.80 9.711±4.27 20.704±4.60
ENST00000417658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.269±0.00 N/A N/A N/A
ENSG00000199407 ENST00000362537 N/A N/A N/A N/A N/A N/A 8.164±7.96 0.659±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000215227 ENST00000475013 N/A N/A N/A N/A 0.044±0.00 N/A 0.850±0.00 N/A N/A N/A N/A 0.207±0.00 N/A N/A
ENSG00000222235 ENST00000410303 N/A 0.809±0.00 N/A N/A N/A N/A 0.254±0.00 1.355±0.00 N/A N/A N/A N/A N/A 0.245±0.00
ENSG00000225112 ENST00000412388 N/A 0.610±0.00 N/A 0.182±0.00 N/A N/A N/A N/A N/A 0.124±0.01 N/A N/A N/A 0.249±0.00
ENSG00000229751 ENST00000446193 0.038±0.00 0.019±0.00 N/A 0.074±0.02 N/A N/A 0.036±0.00 N/A N/A N/A N/A 0.070±0.00 0.075±0.00 N/A
ENSG00000234091 ENST00000449462 N/A 0.078±0.00 N/A 0.129±0.00 0.039±0.00 N/A N/A 0.452±0.27 1.062±0.00 N/A 0.188±0.00 N/A N/A 0.182±0.00
ENSG00000268549 ENST00000600850 0.284±0.00 0.915±0.00 0.645±0.00 0.272±0.08 0.471±0.00 0.308±0.18 0.183±0.11 0.386±0.00 0.161±0.03 0.623±0.27 0.045±0.00 0.269±0.17 0.124±0.10 0.127±0.04
ENSG00000273474 ENST00000609756 0.083±0.00 0.318±0.00 N/A 0.049±0.00 0.216±0.00 0.225±0.20 0.099±0.00 0.184±0.00 0.021±0.00 0.235±0.00 N/A 0.320±0.24 0.149±0.02 0.082±0.04
ENSG00000278100 ENST00000612546 0.170±0.00 0.518±0.00 N/A 0.133±0.00 0.178±0.00 0.371±0.00 0.169±0.00 0.655±0.00 0.107±0.00 0.604±0.00 0.052±0.00 N/A N/A 0.272±0.00

Loading