C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000635_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000096306-ENSDARG00000059128 CGP 7955 6:3300289-3322070
GeneTranscriptPositionBiotype
ENSDARG00000059128 (uqcrh)
ubiquinol-cytochrome c reductase hinge protein 		ENSDART00000082151 (uqcrh-002) 3316356-3321847 protein_coding
ENSDART00000151020 (uqcrh-003) 3316353-3321846 protein_coding
ENSDART00000151765 (uqcrh-001) 3316353-3322070 protein_coding
ENSDARG00000096306 (LRRC41)
leucine rich repeat containing 41 		ENSDART00000151416 (LRRC41-001) 3300289-3314225 protein_coding
CIL_000635_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000132128-ENSG00000173660 CGP 9606 1:46261196-46316776
GeneTranscriptPositionBiotype
ENSG00000132128 (LRRC41)
leucine rich repeat containing 41 		ENST00000343304 (LRRC41-201) 46278401-46303366 protein_coding
ENST00000469150 (LRRC41-004) 46296742-46300780 processed_transcript
ENST00000472710 (LRRC41-002) 46278404-46299890 nonsense_mediated_decay
ENST00000496156 (LRRC41-005) 46261196-46281161 protein_coding
ENST00000498402 (LRRC41-003) 46284167-46303274 nonsense_mediated_decay
ENST00000615587 (LRRC41-006) 46278403-46303263 protein_coding
ENST00000617190 (LRRC41-001) 46277462-46303608 protein_coding
ENST00000617760 (LRRC41-202) 46278401-46286112 protein_coding
ENSG00000173660 (UQCRH)
ubiquinol-cytochrome c reductase hinge protein 		ENST00000311672 (UQCRH-001) 46303631-46316776 protein_coding
ENST00000460947 (UQCRH-004) 46309921-46316776 retained_intron
ENST00000486951 (UQCRH-003) 46303707-46309673 retained_intron
ENST00000489056 (UQCRH-005) 46303698-46316776 nonsense_mediated_decay
ENST00000496387 (UQCRH-002) 46303709-46316776 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000635_0001ENSDARG00000059128ENSDART00000082151ENSDART00000151020ENSDART00000151765ENSDARG00000096306ENSDART00000151416CIL_000635_0002ENSG00000132128ENST00000343304ENST00000469150ENST00000472710ENST00000496156ENST00000498402ENST00000615587ENST00000617190ENST00000617760ENSG00000173660ENST00000311672ENST00000460947ENST00000486951ENST00000489056ENST00000496387
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000635_0001ENSDARG00000059128ENSDART00000082151ENSDART00000151020ENSDART00000151765ENSDARG00000096306ENSDART00000151416CIL_000635_0002ENSG00000132128ENST00000343304ENST00000469150ENST00000472710ENST00000496156ENST00000498402ENST00000615587ENST00000617190ENST00000617760ENSG00000173660ENST00000311672ENST00000496387
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000059128 ENSDART00000082151 N/A N/A N/A 180.364±80.82 N/A N/A 330.731±186.71 216.505±139.91 11.805±0.00 N/A 67.616±0.00 N/A N/A N/A
ENSDART00000151020 N/A N/A N/A 27.333±0.00 N/A N/A N/A 11.357±0.00 4.836±0.00 N/A 26.087±0.00 N/A N/A N/A
ENSDART00000151765 N/A N/A N/A 35.347±19.63 N/A N/A 79.593±1.84 8.831±0.00 4.860±0.00 N/A 9.205±0.00 N/A N/A N/A
ENSDARG00000096306 ENSDART00000151416 N/A N/A N/A 1.022±0.13 N/A N/A 1.526±0.18 4.018±0.00 0.371±0.00 N/A 0.794±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132128 ENST00000343304 N/A N/A 2.321±0.00 N/A 2.547±0.75 N/A N/A N/A N/A N/A 5.225±0.00 N/A N/A N/A
ENST00000469150 N/A 1.319±0.00 0.406±0.00 0.303±0.00 N/A N/A N/A N/A N/A N/A N/A 0.890±0.00 N/A N/A
ENST00000472710 N/A N/A N/A N/A N/A N/A N/A 0.363±0.00 N/A N/A N/A N/A N/A N/A
ENST00000496156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.340±0.00 N/A N/A N/A
ENST00000498402 N/A N/A N/A N/A N/A 1.528±0.00 N/A N/A N/A 0.645±0.00 N/A N/A N/A N/A
ENST00000615587 24.183±0.00 11.839±0.00 N/A 6.261±4.75 14.117±0.00 5.974±4.21 6.596±5.54 16.073±0.00 4.475±2.03 12.392±11.87 20.809±0.00 23.771±19.27 26.879±6.45 25.018±0.00
ENST00000617190 N/A N/A N/A N/A 0.520±0.00 N/A 0.244±0.00 N/A N/A N/A 0.834±0.00 5.263±0.00 N/A N/A
ENST00000617760 N/A 7.905±0.00 N/A 3.749±1.49 4.739±0.00 8.001±0.00 3.016±2.09 6.335±3.17 6.934±0.00 4.951±3.41 8.851±5.69 16.402±10.18 21.182±10.48 31.530±18.91
ENSG00000173660 ENST00000311672 48.131±0.00 73.956±0.00 38.301±0.00 115.445±19.60 62.945±19.31 92.322±14.68 217.446±42.55 79.450±20.72 49.569±2.88 46.933±22.15 80.561±31.92 100.591±30.53 84.939±8.11 56.402±14.13
ENST00000460947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496387 26.441±0.00 25.766±0.00 N/A 34.682±3.19 27.075±21.83 20.573±9.42 75.760±0.00 16.301±8.95 11.296±4.35 8.983±4.94 18.845±0.00 15.370±3.81 15.727±2.85 17.194±0.00

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