C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 41
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000617760 LRRC41-202 ENSG00000132128 9606 - 1:46278401-46286112 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000617760
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000617760 7.905±0.00 3.749±1.49 4.739±0.00 8.001±0.00 3.016±2.09 6.335±3.17 6.934±0.00 4.951±3.41 8.851±5.69 16.402±10.18 21.182±10.48 31.530±18.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000636 CIL_000636_0002 CGP 1:46247688-46303608
CIL_000635 CIL_000635_0002 CGP 1:46261196-46316776

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IDA membrane
GO:0016567 IEA protein ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030471 Lrrc41-001 protein_coding Mus_musculus 0 2372
ENSMUST00000139147 Rad54l-004 processed_transcript Mus_musculus 0 658
ENSMUST00000134983 Lrrc41-006 processed_transcript Mus_musculus 0 435
ENSMUST00000102704 Rad54l-001 protein_coding Mus_musculus 8e-17 94
ENSMUST00000102705 Rad54l-002 protein_coding Mus_musculus 8e-17 94

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