C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: leucine rich repeat containing 41
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000617190 LRRC41-001 ENSG00000132128 9606 - 1:46277462-46303608 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartMuscleOvaryENST00000617190
Transcript ID Breast Heart Muscle Ovary
ENST00000617190 0.520±0.00 0.244±0.00 0.834±0.00 5.263±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000636 CIL_000636_0002 CGP 1:46247688-46303608
CIL_000635 CIL_000635_0002 CGP 1:46261196-46316776

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0016020 IDA membrane
GO:0016567 IEA protein ubiquitination
GO:0042803 IEA protein homodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030471 Lrrc41-001 protein_coding Mus_musculus 0 3664
ENSMUST00000139147 Rad54l-004 processed_transcript Mus_musculus 0 1016
ENSMUST00000138952 Lrrc41-003 processed_transcript Mus_musculus 0 481
ENSMUST00000102704 Rad54l-001 protein_coding Mus_musculus 0 444
ENSMUST00000102705 Rad54l-002 protein_coding Mus_musculus 0 444
ENSMUST00000134983 Lrrc41-006 processed_transcript Mus_musculus 0 435
ENSMUST00000133799 Lrrc41-005 processed_transcript Mus_musculus 0 368
ENSMUST00000154274 Lrrc41-002 processed_transcript Mus_musculus 0 259
ENSMUST00000152577 Lrrc41-004 processed_transcript Mus_musculus 0 207

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