C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00063Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000018891-ENSDARG00000025350 CGP 7955 1:52206821-52223814
GeneTranscriptPositionBiotype
ENSDARG00000018891 (rnaseh2a)
ribonuclease H2, subunit A 		ENSDART00000045894 (rnaseh2a-001) 52206821-52214585 protein_coding
ENSDART00000150846 (rnaseh2a-002) 52206996-52213061 nonsense_mediated_decay
ENSDARG00000025350 (prdx2)
peroxiredoxin 2 		ENSDART00000040397 (prdx2-001) 52215803-52223814 protein_coding
CIL_00063Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000052926-ENSMUSG00000005161 CGP 10090 8:84956610-84974834
GeneTranscriptPositionBiotype
ENSMUSG00000005161 (Prdx2)
peroxiredoxin 2 		ENSMUST00000005292 (Prdx2-001) 84969611-84974834 protein_coding
ENSMUST00000109733 (Prdx2-005) 84969767-84974834 protein_coding
ENSMUST00000109734 (Prdx2-003) 84969587-84974834 protein_coding
ENSMUST00000125893 (Prdx2-006) 84969857-84971621 protein_coding
ENSMUST00000127215 (Prdx2-007) 84971456-84974311 retained_intron
ENSMUST00000138748 (Prdx2-004) 84969694-84971125 retained_intron
ENSMUST00000143402 (Prdx2-002) 84969694-84972103 retained_intron
ENSMUST00000164807 (Prdx2-201) 84970239-84974660 protein_coding
ENSMUSG00000052926 (Rnaseh2a)
ribonuclease H2, large subunit 		ENSMUST00000065049 (Rnaseh2a-005) 84957667-84966041 protein_coding
ENSMUST00000109736 (Rnaseh2a-001) 84956610-84969740 protein_coding
ENSMUST00000109738 (Rnaseh2a-201) 84956610-84966011 protein_coding
ENSMUST00000122931 (Rnaseh2a-004) 84957974-84965961 retained_intron
ENSMUST00000126029 (Rnaseh2a-009) 84957678-84958116 retained_intron
ENSMUST00000128972 (Rnaseh2a-006) 84957667-84966064 protein_coding
ENSMUST00000130902 (Rnaseh2a-003) 84965952-84966876 protein_coding
ENSMUST00000137791 (Rnaseh2a-002) 84966229-84969581 processed_transcript
ENSMUST00000140561 (Rnaseh2a-007) 84965607-84969767 protein_coding
ENSMUST00000147812 (Rnaseh2a-008) 84957667-84969440 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00063Y_0001ENSDARG00000018891ENSDART00000045894ENSDART00000150846ENSDARG00000025350ENSDART00000040397CIL_00063Y_0002ENSMUSG00000005161ENSMUST00000005292ENSMUST00000109733ENSMUST00000109734ENSMUST00000125893ENSMUST00000127215ENSMUST00000138748ENSMUST00000143402ENSMUST00000164807ENSMUSG00000052926ENSMUST00000065049ENSMUST00000109736ENSMUST00000109738ENSMUST00000122931ENSMUST00000126029ENSMUST00000128972ENSMUST00000130902ENSMUST00000137791ENSMUST00000140561ENSMUST00000147812
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00063Y_0001ENSDARG00000018891ENSDART00000045894ENSDART00000150846ENSDARG00000025350ENSDART00000040397CIL_00063Y_0002ENSMUSG00000005161ENSMUST00000005292ENSMUST00000109734ENSMUST00000125893ENSMUST00000127215ENSMUST00000143402ENSMUST00000164807ENSMUSG00000052926ENSMUST00000065049ENSMUST00000109736ENSMUST00000122931ENSMUST00000140561ENSMUST00000147812
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000018891 ENSDART00000045894 N/A N/A N/A 3.677±2.13 N/A N/A 5.636±1.42 10.020±0.00 0.222±0.00 N/A 2.744±0.00 N/A N/A N/A
ENSDART00000150846 N/A N/A N/A N/A N/A N/A 2.035±0.73 N/A N/A N/A 0.696±0.00 N/A N/A N/A
ENSDARG00000025350 ENSDART00000040397 N/A N/A N/A 83.522±26.83 N/A N/A 81.598±74.87 45.572±49.63 62.893±0.00 N/A 86.109±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005161 ENSMUST00000005292 98.489±17.95 114.048±23.77 116.718±0.00 231.770±4.04 67.238±25.23 85.323±10.44 125.653±26.61 113.160±17.34 160.406±188.84 64.144±7.19 34.022±11.78 126.054±50.81 42.514±46.23 N/A
ENSMUST00000109733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109734 N/A N/A N/A 43.011±0.00 N/A N/A N/A N/A 111.654±45.54 N/A N/A N/A N/A N/A
ENSMUST00000125893 N/A N/A N/A 39.074±0.00 N/A N/A N/A N/A N/A N/A N/A 50.344±0.00 20.851±0.00 N/A
ENSMUST00000127215 N/A N/A N/A N/A N/A N/A N/A N/A 531.703±74.59 N/A 26.630±0.00 N/A 93.943±35.63 N/A
ENSMUST00000138748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143402 N/A N/A N/A N/A N/A N/A 64.821±4.47 N/A 172.654±78.20 24.567±0.00 N/A N/A 41.273±0.00 N/A
ENSMUST00000164807 N/A 97.605±15.13 70.736±0.00 17.151±0.00 44.950±0.00 N/A N/A N/A 152.057±0.00 N/A 32.081±8.54 114.590±66.88 40.098±35.31 N/A
ENSMUSG00000052926 ENSMUST00000065049 N/A N/A N/A 30.673±0.00 22.436±0.00 26.010±0.00 N/A N/A N/A N/A N/A 51.663±6.10 13.639±3.47 142.134±15.22
ENSMUST00000109736 N/A 11.824±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000122931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 29.726±0.00 16.333±5.04 142.398±0.00
ENSMUST00000126029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128972 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 247.632±64.60
ENSMUST00000147812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 230.279±63.86

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