C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00064M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000041481-ENSDARG00000041483 CGP 7955 16:48757476-48848780
GeneTranscriptPositionBiotype
ENSDARG00000041481 (smg5)
Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans) 		ENSDART00000060809 (smg5-001) 48757476-48798276 protein_coding
ENSDARG00000041483 (paqr6)
progestin and adipoQ receptor family member VI 		ENSDART00000060814 (paqr6-201) 48820172-48848780 protein_coding
ENSDART00000154704 (paqr6-001) 48803482-48846622 protein_coding
ENSDART00000156851 (paqr6-002) 48803340-48846670 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00064M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001415-ENSMUSG00000041423 CGP 10090 3:88336260-88368541
GeneTranscriptPositionBiotype
ENSMUSG00000001415 (Smg5)
Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans) 		ENSMUST00000001451 (Smg5-201) 88336260-88362337 protein_coding
ENSMUSG00000041423 (Paqr6)
progestin and adipoQ receptor family member VI 		ENSMUST00000123200 (Paqr6-004) 88364593-88365802 retained_intron
ENSMUST00000147818 (Paqr6-005) 88366722-88368541 retained_intron
ENSMUST00000147948 (Paqr6-002) 88364584-88368033 protein_coding
ENSMUST00000147991 (Paqr6-001) 88364589-88368541 protein_coding
ENSMUST00000149640 (Paqr6-003) 88364591-88367243 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00064M_0001ENSDARG00000041481ENSDART00000060809ENSDARG00000041483ENSDART00000060814ENSDART00000154704ENSDART00000156851CIL_00064M_0002ENSMUSG00000001415ENSMUST00000001451ENSMUSG00000041423ENSMUST00000123200ENSMUST00000147818ENSMUST00000147948ENSMUST00000147991ENSMUST00000149640
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00064M_0001ENSDARG00000041481ENSDART00000060809ENSDARG00000041483ENSDART00000060814ENSDART00000154704CIL_00064M_0002ENSMUSG00000001415ENSMUST00000001451ENSMUSG00000041423ENSMUST00000123200ENSMUST00000147818ENSMUST00000147948ENSMUST00000147991ENSMUST00000149640
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000041481 ENSDART00000060809 N/A N/A N/A 0.542±0.00 N/A N/A 0.358±0.00 N/A 1.398±0.00 N/A 2.455±0.00 N/A N/A N/A
ENSDARG00000041483 ENSDART00000060814 N/A N/A N/A 31.670±8.21 N/A N/A 1.849±0.52 4.323±0.90 0.141±0.00 N/A 7.064±0.00 N/A N/A N/A
ENSDART00000154704 N/A N/A N/A 28.307±0.00 N/A N/A 1.239±0.00 N/A N/A N/A 7.406±0.00 N/A N/A N/A
ENSDART00000156851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001415 ENSMUST00000001451 19.359±2.17 17.373±2.14 17.149±1.90 23.006±2.14 18.346±4.48 20.322±4.49 13.764±0.50 15.091±2.84 15.267±9.33 16.542±1.43 13.306±2.60 27.938±5.14 28.189±14.18 38.842±10.00
ENSMUSG00000041423 ENSMUST00000123200 1.115±0.00 N/A 3.815±0.00 N/A 2.311±0.00 N/A N/A N/A 1.570±1.25 N/A 0.098±0.03 0.710±0.00 0.043±0.00 N/A
ENSMUST00000147818 0.577±0.21 0.954±0.17 7.243±1.17 0.589±0.41 1.542±0.11 0.632±0.35 0.326±0.17 0.271±0.06 0.594±0.91 1.756±0.50 0.267±0.09 1.707±0.55 0.188±0.13 1.047±0.68
ENSMUST00000147948 1.705±0.40 3.631±1.24 10.531±2.72 0.169±0.00 3.854±1.33 1.536±0.52 0.882±0.51 0.743±0.21 1.322±1.34 4.149±0.34 0.398±0.11 4.546±1.25 0.238±0.11 0.877±0.22
ENSMUST00000147991 0.574±0.26 0.659±0.25 3.591±0.92 1.719±2.18 2.357±0.37 0.726±0.11 0.300±0.15 0.311±0.04 0.422±0.43 1.436±0.26 0.122±0.03 4.170±1.51 0.200±0.00 0.420±0.11
ENSMUST00000149640 N/A N/A N/A N/A N/A N/A N/A N/A 0.061±0.01 N/A N/A N/A N/A N/A

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