C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00064O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000031817-ENSDARG00000074812 CGP 7955 1:24179845-24296137
GeneTranscriptPositionBiotype
ENSDARG00000031817 (trim2a)
tripartite motif-containing 2a 		ENSDART00000050445 (trim2a-001) 24179845-24227681 protein_coding
ENSDARG00000074812 (fhdc1)
formin homology domain containing 1 		ENSDART00000111686 (fhdc1-201) 24256266-24277420 protein_coding
ENSDART00000134470 (fhdc1-001) 24256914-24296137 protein_coding
CIL_00064O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027993-ENSMUSG00000041842 CGP 10090 3:84160439-84480429
GeneTranscriptPositionBiotype
ENSMUSG00000027993 (Trim2)
tripartite motif-containing 2 		ENSMUST00000054990 (Trim2-002) 84163722-84270791 protein_coding
ENSMUST00000065380 (Trim2-005) 84163337-84212838 protein_coding
ENSMUST00000107691 (Trim2-003) 84160440-84259812 protein_coding
ENSMUST00000107692 (Trim2-001) 84160439-84304809 protein_coding
ENSMUST00000107693 (Trim2-201) 84161874-84220877 protein_coding
ENSMUST00000107695 (Trim2-004) 84160441-84220889 protein_coding
ENSMUST00000122849 (Trim2-012) 84192200-84305397 protein_coding
ENSMUST00000128574 (Trim2-010) 84163707-84220845 retained_intron
ENSMUST00000132283 (Trim2-011) 84192211-84305446 protein_coding
ENSMUST00000136651 (Trim2-009) 84206470-84220861 retained_intron
ENSMUST00000136805 (Trim2-006) 84299962-84304741 processed_transcript
ENSMUST00000137596 (Trim2-008) 84189802-84220874 retained_intron
ENSMUST00000140568 (Trim2-017) 84177251-84190523 retained_intron
ENSMUST00000140856 (Trim2-007) 84207779-84220874 retained_intron
ENSMUST00000147901 (Trim2-014) 84193359-84259369 protein_coding
ENSMUST00000152953 (Trim2-013) 84257683-84259369 processed_transcript
ENSMUST00000154152 (Trim2-015) 84208381-84220874 protein_coding
ENSMUST00000156347 (Trim2-016) 84190662-84191548 processed_transcript
ENSMUSG00000041842 (Fhdc1)
FH2 domain containing 1 		ENSMUST00000091002 (Fhdc1-001) 84444035-84479491 protein_coding
ENSMUST00000107689 (Fhdc1-002) 84444038-84480429 protein_coding
ENSMUST00000125643 (Fhdc1-004) 84448809-84453763 retained_intron
ENSMUST00000131065 (Fhdc1-003) 84474523-84478982 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00064O_0001ENSDARG00000031817ENSDART00000050445ENSDARG00000074812ENSDART00000111686ENSDART00000134470CIL_00064O_0002ENSMUSG00000027993ENSMUST00000054990ENSMUST00000065380ENSMUST00000107691ENSMUST00000107692ENSMUST00000107693ENSMUST00000107695ENSMUST00000122849ENSMUST00000128574ENSMUST00000132283ENSMUST00000136651ENSMUST00000136805ENSMUST00000137596ENSMUST00000140568ENSMUST00000140856ENSMUST00000147901ENSMUST00000152953ENSMUST00000154152ENSMUST00000156347ENSMUSG00000041842ENSMUST00000091002ENSMUST00000107689ENSMUST00000125643ENSMUST00000131065
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00064O_0001ENSDARG00000031817ENSDART00000050445ENSDARG00000074812ENSDART00000111686ENSDART00000134470CIL_00064O_0002ENSMUSG00000027993ENSMUST00000054990ENSMUST00000065380ENSMUST00000107691ENSMUST00000107692ENSMUST00000107693ENSMUST00000107695ENSMUST00000128574ENSMUST00000147901ENSMUSG00000041842ENSMUST00000091002ENSMUST00000107689ENSMUST00000131065
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000031817 ENSDART00000050445 N/A N/A N/A 3.111±2.73 N/A N/A 0.781±0.16 2.976±0.98 0.043±0.00 N/A 0.315±0.00 N/A N/A N/A
ENSDARG00000074812 ENSDART00000111686 N/A N/A N/A 1.417±0.93 N/A N/A N/A 0.187±0.09 N/A N/A N/A N/A N/A N/A
ENSDART00000134470 N/A N/A N/A 0.831±0.00 N/A N/A 0.046±0.00 0.034±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027993 ENSMUST00000054990 1.794±0.00 4.427±0.00 N/A N/A N/A 16.473±5.89 N/A N/A N/A N/A N/A N/A 0.201±0.13 N/A
ENSMUST00000065380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.123±0.00
ENSMUST00000107691 3.149±1.38 5.781±1.95 2.250±0.21 8.035±1.16 3.175±1.18 13.591±3.30 0.989±0.25 7.908±0.86 2.742±1.87 5.686±1.22 N/A 5.871±2.76 0.538±0.27 0.196±0.12
ENSMUST00000107692 N/A N/A N/A 4.771±2.07 N/A N/A N/A N/A 0.781±0.49 N/A 0.095±0.06 1.097±0.00 0.394±0.00 0.033±0.00
ENSMUST00000107693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.049±0.00
ENSMUST00000107695 1.488±0.08 N/A 0.542±0.06 11.329±4.36 N/A N/A N/A N/A 0.289±0.00 N/A N/A 2.701±1.59 0.393±0.00 N/A
ENSMUST00000122849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128574 0.516±0.00 N/A N/A N/A 0.936±0.00 N/A N/A N/A N/A N/A N/A N/A 0.078±0.00 N/A
ENSMUST00000132283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147901 N/A 17.540±4.27 N/A N/A 7.543±0.36 30.499±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152953 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000041842 ENSMUST00000091002 0.350±0.00 0.240±0.00 1.465±0.43 N/A 0.802±0.40 0.558±0.02 0.153±0.00 N/A 6.420±2.62 0.821±0.02 N/A 2.540±1.34 N/A N/A
ENSMUST00000107689 0.410±0.36 1.360±0.39 2.842±0.45 0.918±0.00 0.844±0.19 2.064±0.81 0.078±0.07 0.361±0.10 2.144±2.27 5.861±1.31 0.076±0.03 5.444±2.37 16.612±8.05 9.985±4.00
ENSMUST00000125643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131065 N/A N/A N/A N/A N/A N/A 0.211±0.04 N/A N/A N/A N/A N/A N/A N/A

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