C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00065T_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000029546-ENSDARG00000032126 CGP 7955 20:29495661-29500844
GeneTranscriptPositionBiotype
ENSDARG00000029546 (grem1a)
gremlin 1 homolog a, cysteine knot superfamily (Xenopus laevis) 		ENSDART00000043382 (grem1a-001) 29495661-29497485 protein_coding
ENSDARG00000032126 (scg5)
secretogranin V 		ENSDART00000045249 (scg5-001) 29497714-29500844 protein_coding
ENSDART00000152906 (scg5-002) 29497727-29500767 protein_coding
ENSDART00000153237 (scg5-003) 29499495-29500403 retained_intron
CIL_00065T_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074934-ENSMUSG00000023236 CGP 10090 2:113746164-113829121
GeneTranscriptPositionBiotype
ENSMUSG00000023236 (Scg5)
secretogranin V 		ENSMUST00000024005 (Scg5-001) 113776362-113829121 protein_coding
ENSMUST00000139975 (Scg5-002) 113827340-113828762 processed_transcript
ENSMUSG00000074934 (Grem1)
gremlin 1 		ENSMUST00000099575 (Grem1-001) 113746164-113758646 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00065T_0001ENSDARG00000029546ENSDART00000043382ENSDARG00000032126ENSDART00000045249ENSDART00000152906ENSDART00000153237CIL_00065T_0002ENSMUSG00000023236ENSMUST00000024005ENSMUST00000139975ENSMUSG00000074934ENSMUST00000099575
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00065T_0001ENSDARG00000029546ENSDART00000043382ENSDARG00000032126ENSDART00000045249ENSDART00000152906ENSDART00000153237CIL_00065T_0002ENSMUSG00000023236ENSMUST00000024005ENSMUST00000139975ENSMUSG00000074934ENSMUST00000099575
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000029546 ENSDART00000043382 N/A N/A N/A 0.182±0.03 N/A N/A 0.738±0.85 0.538±0.16 N/A N/A N/A N/A N/A N/A
ENSDARG00000032126 ENSDART00000045249 N/A N/A N/A 7.848±5.21 N/A N/A 0.275±0.01 1.136±0.81 N/A N/A 1.456±0.00 N/A N/A N/A
ENSDART00000152906 N/A N/A N/A 2.934±0.92 N/A N/A 3.698±0.00 0.317±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000153237 N/A N/A N/A N/A N/A N/A 0.355±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023236 ENSMUST00000024005 0.254±0.22 9.420±2.78 0.489±0.02 45.184±6.15 0.206±0.16 2.881±0.73 0.037±0.01 4.321±0.31 0.066±0.04 0.377±0.05 0.073±0.05 2.102±0.77 0.789±0.79 0.562±0.09
ENSMUST00000139975 N/A N/A N/A N/A 0.070±0.00 N/A N/A N/A 0.097±0.07 0.129±0.00 N/A N/A N/A N/A
ENSMUSG00000074934 ENSMUST00000099575 0.014±0.00 0.051±0.03 0.041±0.01 0.634±0.31 1.474±0.44 27.237±4.13 0.232±0.03 0.146±0.11 0.026±0.02 0.502±0.08 0.042±0.05 5.964±2.45 0.034±0.02 0.021±0.01

Loading