C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00067B_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205111-ENSG00000011566 CGP 9606 2:39175646-39437312
GeneTranscriptPositionBiotype
ENSG00000011566 (MAP4K3)
mitogen-activated protein kinase kinase kinase kinase 3 		ENST00000263881 (MAP4K3-001) 39249266-39437312 protein_coding
ENST00000341681 (MAP4K3-006) 39249283-39437301 protein_coding
ENST00000414968 (MAP4K3-008) 39293243-39325933 nonsense_mediated_decay
ENST00000429397 (MAP4K3-005) 39325788-39437147 nonsense_mediated_decay
ENST00000437545 (MAP4K3-014) 39249278-39379809 protein_coding
ENST00000437968 (MAP4K3-003) 39337575-39437228 nonsense_mediated_decay
ENST00000465701 (MAP4K3-009) 39290330-39299845 retained_intron
ENST00000474502 (MAP4K3-010) 39290328-39294297 processed_transcript
ENST00000475457 (MAP4K3-012) 39260691-39267425 retained_intron
ENST00000479708 (MAP4K3-013) 39258523-39261117 retained_intron
ENST00000484274 (MAP4K3-002) 39356165-39437065 protein_coding
ENST00000495648 (MAP4K3-011) 39271911-39278419 retained_intron
ENST00000497566 (MAP4K3-007) 39288215-39315517 retained_intron
ENSG00000205111 (CDKL4)
cyclin-dependent kinase-like 4 		ENST00000378803 (CDKL4-001) 39178547-39229532 protein_coding
ENST00000395035 (CDKL4-002) 39178547-39229532 protein_coding
ENST00000419111 (CDKL4-004) 39204527-39229588 nonsense_mediated_decay
ENST00000451199 (CDKL4-003) 39175646-39187707 protein_coding
ENSG00000231312 (AC007246.3)
 ENST00000366187 (AC007246.3-011) 39453839-39454726 antisense
ENST00000415640 (AC007246.3-001) 39518639-39665343 antisense
ENST00000422128 (AC007246.3-005) 39437402-39584648 antisense
ENST00000425775 (AC007246.3-007) 39516866-39599477 antisense
ENST00000426083 (AC007246.3-003) 39436637-39604076 antisense
ENST00000438649 (AC007246.3-004) 39514146-39599539 antisense
ENST00000443038 (AC007246.3-010) 39437369-39516768 antisense
ENST00000445520 (AC007246.3-009) 39437431-39474758 antisense
ENST00000446698 (AC007246.3-008) 39453922-39624356 antisense
ENST00000449569 (AC007246.3-002) 39437416-39601344 antisense
ENST00000451547 (AC007246.3-006) 39518675-39599539 antisense
ENSG00000252473 (SNORA67)
Small nucleolar RNA SNORA67 		ENST00000516664 (SNORA67.1-207) 39283657-39283791 snoRNA
ENSG00000273035 (RP11-449G16.1)
 ENST00000609671 (RP11-449G16.1-001) 39323328-39323804 sense_intronic
CIL_00067B_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033966-ENSMUSG00000024242 CGP 10090 17:80523550-80728093
GeneTranscriptPositionBiotype
ENSMUSG00000024242 (Map4k3)
mitogen-activated protein kinase kinase kinase kinase 3 		ENSMUST00000025089 (Map4k3-201) 80580512-80728093 protein_coding
ENSMUST00000112389 (Map4k3-202) 80580512-80728093 protein_coding
ENSMUSG00000033966 (Cdkl4)
cyclin-dependent kinase-like 4 		ENSMUST00000086545 (Cdkl4-201) 80523550-80563834 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00067B_0001ENSG00000011566ENST00000263881ENST00000341681ENST00000437545ENST00000484274ENSG00000205111ENST00000378803ENST00000395035ENST00000419111ENST00000451199ENSG00000231312ENST00000366187ENST00000422128ENST00000445520ENST00000449569ENSG00000252473ENST00000516664ENSG00000273035ENST00000609671CIL_00067B_0002ENSMUSG00000024242ENSMUST00000025089ENSMUST00000112389ENSMUSG00000033966ENSMUST00000086545
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000011566 ENST00000263881 2.109±0.00 N/A N/A 1.349±0.23 1.130±0.00 1.010±0.00 1.121±0.36 1.484±0.00 0.699±0.40 1.197±0.00 N/A 3.180±0.24 1.670±0.55 3.324±0.00
ENST00000341681 3.367±0.00 2.356±0.00 1.790±0.00 2.492±1.50 1.995±0.27 1.734±0.43 4.307±0.00 2.335±1.54 1.776±0.58 4.246±0.00 3.332±0.80 3.882±0.41 2.650±0.95 3.749±0.00
ENST00000414968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437545 N/A N/A 2.908±0.00 N/A N/A N/A 1.944±0.00 2.298±0.00 0.947±0.00 7.308±0.00 N/A 1.729±0.00 N/A N/A
ENST00000437968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474502 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.505±0.00
ENST00000495648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000205111 ENST00000378803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A 0.358±0.00
ENST00000395035 N/A 0.019±0.00 0.240±0.00 0.085±0.00 0.122±0.07 0.130±0.00 0.019±0.00 0.018±0.00 0.243±0.00 0.231±0.11 N/A N/A 0.093±0.02 0.528±0.25
ENST00000419111 N/A N/A N/A N/A N/A N/A 0.485±0.00 N/A N/A N/A N/A 0.970±0.00 0.071±0.03 1.325±0.00
ENST00000451199 N/A 0.144±0.00 N/A 0.163±0.06 0.016±0.00 0.132±0.00 N/A N/A N/A N/A N/A 0.102±0.00 N/A N/A
ENSG00000231312 ENST00000366187 N/A N/A N/A N/A 3.398±0.00 N/A N/A N/A N/A N/A N/A 2.638±0.00 N/A N/A
ENST00000415640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422128 N/A N/A 5.497±0.00 12.271±0.00 N/A N/A 1.797±0.00 N/A 1.935±0.00 N/A 1.488±0.00 3.701±0.00 N/A N/A
ENST00000425775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445520 6.699±0.00 1.777±0.00 N/A N/A 3.950±2.12 N/A 3.363±0.00 N/A 6.449±0.00 3.960±0.00 1.597±0.23 26.456±0.00 9.750±6.02 8.131±0.00
ENST00000446698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449569 1.091±0.00 N/A 0.389±0.00 1.954±0.86 0.756±0.06 0.594±0.00 0.431±0.25 1.074±0.30 0.461±0.00 0.874±0.07 0.350±0.00 0.832±0.61 0.871±0.43 0.747±0.17
ENST00000451547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000252473 ENST00000516664 0.294±0.00 N/A N/A 1.887±0.00 0.601±0.00 N/A 0.709±0.00 0.740±0.00 N/A N/A N/A 3.328±3.80 N/A 0.275±0.00
ENSG00000273035 ENST00000609671 0.040±0.00 0.235±0.00 N/A 0.355±0.00 0.197±0.00 0.189±0.00 0.456±0.40 1.207±1.10 1.699±0.00 0.482±0.39 N/A 0.583±0.21 0.157±0.05 0.184±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024242 ENSMUST00000025089 12.317±3.25 10.411±2.17 15.420±1.84 9.979±2.90 7.344±2.13 9.473±3.57 5.455±1.60 7.574±4.50 3.612±1.41 25.329±3.23 2.067±0.53 9.009±1.64 9.572±3.89 3.303±1.92
ENSMUST00000112389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.890±0.00
ENSMUSG00000033966 ENSMUST00000086545 0.957±0.59 0.119±0.04 N/A 1.298±0.00 0.264±0.11 0.062±0.04 0.080±0.05 0.115±0.05 0.089±0.05 1.225±0.61 0.014±0.01 1.008±0.25 0.284±0.14 8.548±4.77

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