C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047490 Ndst2-201 ENSMUSG00000039308 10090 - 14:20723739-20730327 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047490
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047490 9.701±1.64 6.768±1.88 5.507±2.78 6.579±2.51 12.824±1.67 6.152±1.19 0.619±0.00 4.661±2.52 6.922±3.17 6.369±2.64 1.284±0.87 11.283±6.74 3.016±1.24 4.999±2.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BH CIL_0006BH_0003 CGP 14:20707552-20730327
CIL_00008V CIL_00008V_0002 CGP 14:20723739-20794088

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002002 IMP regulation of angiotensin levels in blood
GO:0005794 IDA Golgi apparatus
GO:0006024 TAS glycosaminoglycan biosynthetic process
GO:0008146 IDA sulfotransferase activity
GO:0009987 IMP cellular process
GO:0015012 IEA heparan sulfate proteoglycan biosynthetic process
GO:0015016 TAS [heparan sulfate]-glucosamine N-sulfotransferase activity
GO:0016021 IEA integral component of membrane
GO:0019213 IDA deacetylase activity
GO:0030210 IEA heparin biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299641 NDST2-201 protein_coding Homo_sapiens 0 3973
ENST00000309979 NDST2-003 protein_coding Homo_sapiens 0 3973
ENST00000463410 NDST2-004 processed_transcript Homo_sapiens 0 348
ENST00000603027 RP11-574K11.31-001 nonsense_mediated_decay Homo_sapiens 0 3362

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