C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2 {ECO:0000313|Ensembl:ENSP00000475031}
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000603027 RP11-574K11.31-001 ENSG00000272916 9606 - 10:73796514-73811651 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonTestisENST00000603027
Transcript ID Adipose Adrenal Breast Colon Testis
ENST00000603027 7.004±0.00 8.838±0.00 3.987±0.00 1.112±0.00 7.820±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GZ CIL_0001GZ_0001 CGP 10:73782047-73801797
CIL_0006BH CIL_0006BH_0002 CGP 10:73785582-73811651

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008146 IEA sulfotransferase activity
GO:0008152 IEA metabolic process
GO:0015016 IEA [heparan sulfate]-glucosamine N-sulfotransferase activity
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047490 Ndst2-201 protein_coding Mus_musculus 0 3362
ENSMUST00000169273 Ndst1-201 protein_coding Mus_musculus 0 874
ENSMUST00000022358 Zswim8-201 protein_coding Mus_musculus 0 595
ENSDART00000085748 NDST1 (2 of 2)-201 protein_coding Danio_rerio 0 344

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