C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006BJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000187764-ENSG00000130222 CGP 9606 9:89360787-89606555
GeneTranscriptPositionBiotype
ENSG00000130222 (GADD45G)
growth arrest and DNA-damage-inducible, gamma 		ENST00000252506 (GADD45G-001) 89605013-89606555 protein_coding
ENST00000375769 (GADD45G-002) 89605038-89606235 protein_coding
ENST00000494726 (GADD45G-003) 89605092-89606098 processed_transcript
ENSG00000225460 (RP13-93L13.1)
 ENST00000430017 (RP13-93L13.1-001) 89472237-89472692 processed_pseudogene
ENSG00000231799 (RP13-93L13.2)
 ENST00000438325 (RP13-93L13.2-001) 89449558-89450754 processed_pseudogene
CIL_0006BJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021451-ENSMUSG00000021453 CGP 10090 13:51701246-51848468
GeneTranscriptPositionBiotype
ENSMUSG00000021451 (Sema4d)
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D 		ENSMUST00000021900 (Sema4d-002) 51701246-51793747 protein_coding
ENSMUST00000110039 (Sema4d-003) 51701250-51734763 protein_coding
ENSMUST00000110040 (Sema4d-001) 51701246-51793673 protein_coding
ENSMUST00000125511 (Sema4d-004) 51711500-51714159 retained_intron
ENSMUST00000138228 (Sema4d-006) 51723656-51748815 processed_transcript
ENSMUST00000139018 (Sema4d-010) 51725271-51754765 processed_transcript
ENSMUST00000139858 (Sema4d-012) 51725390-51777111 processed_transcript
ENSMUST00000139865 (Sema4d-005) 51723656-51748919 processed_transcript
ENSMUST00000143396 (Sema4d-007) 51725341-51748726 processed_transcript
ENSMUST00000146238 (Sema4d-008) 51725291-51756802 processed_transcript
ENSMUST00000146922 (Sema4d-009) 51725314-51756668 processed_transcript
ENSMUST00000150662 (Sema4d-011) 51725224-51752165 processed_transcript
ENSMUST00000155896 (Sema4d-013) 51725423-51793664 processed_transcript
ENSMUSG00000021453 (Gadd45g)
growth arrest and DNA-damage-inducible 45 gamma 		ENSMUST00000021903 (Gadd45g-001) 51846678-51848468 protein_coding
ENSMUST00000132480 (Gadd45g-002) 51846744-51848224 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006BJ_0001ENSG00000130222ENST00000252506ENST00000375769ENST00000494726ENSG00000225460ENST00000430017ENSG00000231799ENST00000438325CIL_0006BJ_0002ENSMUSG00000021451ENSMUST00000021900ENSMUST00000110039ENSMUST00000110040ENSMUST00000125511ENSMUST00000138228ENSMUST00000139018ENSMUST00000139858ENSMUST00000139865ENSMUST00000143396ENSMUST00000146238ENSMUST00000146922ENSMUST00000150662ENSMUST00000155896ENSMUSG00000021453ENSMUST00000021903ENSMUST00000132480
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006BJ_0001ENSG00000130222ENST00000252506ENST00000375769ENST00000494726ENSG00000225460ENST00000430017ENSG00000231799ENST00000438325CIL_0006BJ_0002ENSMUSG00000021451ENSMUST00000021900ENSMUST00000110039ENSMUST00000110040ENSMUSG00000021453ENSMUST00000021903ENSMUST00000132480
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130222 ENST00000252506 2.905±0.00 2.093±0.00 N/A 4.756±0.00 2.842±0.00 5.076±4.94 6.013±4.90 6.674±2.48 34.666±0.00 6.577±0.00 8.612±7.13 14.197±9.31 53.134±18.57 15.766±1.55
ENST00000375769 N/A N/A 0.101±0.00 1.787±0.00 N/A 2.145±0.00 3.391±0.00 5.480±0.00 0.859±0.00 2.055±0.55 N/A 8.211±0.00 N/A N/A
ENST00000494726 N/A N/A N/A N/A 1.139±0.12 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225460 ENST00000430017 N/A N/A N/A N/A N/A N/A 0.053±0.00 0.086±0.00 0.622±0.00 0.544±0.00 N/A 0.033±0.00 N/A 0.265±0.00
ENSG00000231799 ENST00000438325 N/A 0.264±0.00 0.322±0.00 0.360±0.00 0.129±0.08 0.035±0.01 0.030±0.00 0.240±0.00 0.416±0.00 0.057±0.00 0.048±0.00 0.065±0.01 N/A 0.045±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021451 ENSMUST00000021900 2.512±2.30 3.353±0.72 1.904±0.04 5.629±1.74 11.877±4.74 6.683±0.67 1.705±0.42 20.408±3.88 1.810±1.59 6.183±0.47 N/A 4.087±1.93 7.222±3.90 0.419±0.10
ENSMUST00000110039 1.182±0.82 N/A 0.496±0.19 N/A N/A N/A N/A N/A 0.324±0.22 1.874±0.35 N/A 0.982±0.25 N/A N/A
ENSMUST00000110040 0.699±0.53 0.466±0.05 0.356±0.07 0.864±0.21 3.916±1.11 1.282±0.25 N/A 5.242±1.22 0.465±0.25 N/A 2.867±0.00 1.149±0.28 2.421±0.83 0.137±0.03
ENSMUST00000125511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000021453 ENSMUST00000021903 34.765±9.13 6.910±4.70 49.205±21.26 31.745±18.57 31.355±14.01 11.123±1.55 10.387±3.28 27.770±2.08 8.822±6.19 22.876±3.90 49.715±24.08 20.931±4.07 57.508±22.16 5.677±1.19
ENSMUST00000132480 5.874±0.00 6.540±1.67 N/A 6.588±2.88 14.153±2.93 3.255±1.01 1.140±0.17 5.693±1.49 1.313±0.60 5.159±0.90 N/A 7.502±1.99 8.423±0.00 1.004±0.36

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