C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: growth arrest and DNA-damage-inducible, gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000252506 GADD45G-001 ENSG00000130222 9606 + 9:89605013-89606555 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000252506
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000252506 2.905±0.00 2.093±0.00 4.756±0.00 2.842±0.00 5.076±4.94 6.013±4.90 6.674±2.48 34.666±0.00 6.577±0.00 8.612±7.13 14.197±9.31 53.134±18.57 15.766±1.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BJ CIL_0006BJ_0001 CGP 9:89360787-89606555
CIL_0008UF CIL_0008UF_0001 VISTA 9:89377569-89978974
CIL_0002K7 CIL_0002K7_0001 CGP 9:89605013-90643104

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000185 IDA activation of MAPKKK activity
GO:0000186 IEA activation of MAPKK activity
GO:0005515 IPI protein binding
GO:0005634 IEA:IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006469 IEA negative regulation of protein kinase activity
GO:0006915 IEA apoptotic process
GO:0006950 IEA response to stress
GO:0007275 IEA multicellular organismal development
GO:0030154 IEA cell differentiation
GO:0043065 IDA positive regulation of apoptotic process
GO:0046330 IDA positive regulation of JNK cascade
GO:0051726 IEA regulation of cell cycle
GO:1900745 IDA positive regulation of p38MAPK cascade

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021903 Gadd45g-001 protein_coding Mus_musculus 0 863
ENSMUST00000132480 Gadd45g-002 retained_intron Mus_musculus 0 228
ENSDART00000063996 gadd45aa-001 protein_coding Danio_rerio 0.000000000001 79

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