C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006D8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000023160-ENSDARG00000006859 CGP 7955 19:44607303-44634278
GeneTranscriptPositionBiotype
ENSDARG00000006859 (nkain1)
Na+/K+ transporting ATPase interacting 1 		ENSDART00000015632 (nkain1-001) 44620667-44634278 protein_coding
ENSDART00000132213 (nkain1-002) 44620826-44629727 protein_coding
ENSDART00000150901 (nkain1-003) 44627582-44630378 retained_intron
ENSDARG00000023160 (snrnp40)
small nuclear ribonucleoprotein 40 (U5) 		ENSDART00000038230 (snrnp40-001) 44607303-44619290 protein_coding
ENSDARG00000083234 (CU207343.1)
 ENSDART00000117761 (CU207343.1-201) 44617888-44617954 miRNA
ENSDARG00000093585 (si:ch211-285e16.3)
si:ch211-285e16.3 		ENSDART00000133473 (si:ch211-285e16.3-001) 44632277-44633783 processed_transcript
CIL_0006D8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074088-ENSMUSG00000078532 CGP 10090 4:130360132-130574173
GeneTranscriptPositionBiotype
ENSMUSG00000074088 (Snrnp40)
small nuclear ribonucleoprotein 40 (U5) 		ENSMUST00000105994 (Snrnp40-001) 130360132-130390026 protein_coding
ENSMUST00000180577 (Snrnp40-002) 130360194-130375576 processed_transcript
ENSMUST00000181161 (Snrnp40-004) 130362627-130365432 processed_transcript
ENSMUST00000181560 (Snrnp40-003) 130385022-130388628 processed_transcript
ENSMUSG00000078532 (Nkain1)
Na+/K+ transporting ATPase interacting 1 		ENSMUST00000105993 (Nkain1-001) 130531618-130574173 protein_coding
ENSMUST00000180498 (Nkain1-003) 130539063-130557988 processed_transcript
ENSMUST00000180884 (Nkain1-002) 130531602-130573966 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006D8_0001ENSDARG00000006859ENSDART00000015632ENSDART00000132213ENSDART00000150901ENSDARG00000023160ENSDART00000038230ENSDARG00000083234ENSDART00000117761ENSDARG00000093585ENSDART00000133473CIL_0006D8_0002ENSMUSG00000074088ENSMUST00000105994ENSMUST00000180577ENSMUST00000181161ENSMUST00000181560ENSMUSG00000078532ENSMUST00000105993ENSMUST00000180498ENSMUST00000180884
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006D8_0001ENSDARG00000006859ENSDART00000015632ENSDART00000150901ENSDARG00000023160ENSDART00000038230ENSDARG00000083234ENSDART00000117761ENSDARG00000093585ENSDART00000133473CIL_0006D8_0002ENSMUSG00000074088ENSMUST00000105994ENSMUST00000180577ENSMUST00000181161ENSMUSG00000078532ENSMUST00000105993ENSMUST00000180884
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006859 ENSDART00000015632 N/A N/A N/A 21.614±1.87 N/A N/A 1.012±0.20 4.489±0.00 0.371±0.00 N/A 0.891±0.00 N/A N/A N/A
ENSDART00000132213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150901 N/A N/A N/A 0.574±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000023160 ENSDART00000038230 N/A N/A N/A 2.468±2.41 N/A N/A 4.081±1.85 10.782±0.00 1.162±0.00 N/A 1.246±0.00 N/A N/A N/A
ENSDARG00000083234 ENSDART00000117761 N/A N/A N/A 62.313±0.00 N/A N/A N/A N/A 4.488±0.00 N/A N/A N/A N/A N/A
ENSDARG00000093585 ENSDART00000133473 N/A N/A N/A 20.489±0.00 N/A N/A 1.373±0.00 N/A 0.260±0.00 N/A 0.874±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000074088 ENSMUST00000105994 17.235±5.55 12.714±1.40 14.962±2.29 26.038±14.95 13.703±2.05 14.303±2.89 7.993±0.31 11.741±0.29 22.452±19.58 13.026±1.40 6.569±0.32 25.538±3.27 25.058±10.47 15.416±5.64
ENSMUST00000180577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.152±0.56
ENSMUST00000181161 N/A N/A N/A 6.008±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.894±0.00
ENSMUST00000181560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000078532 ENSMUST00000105993 2.654±0.00 2.143±0.76 N/A N/A 1.195±0.66 3.659±1.28 N/A 2.865±0.00 0.096±0.04 N/A N/A 4.205±2.01 N/A 2.456±1.44
ENSMUST00000180498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000180884 N/A 3.165±0.78 N/A N/A 0.942±0.27 2.124±0.00 N/A N/A 0.140±0.07 1.543±0.00 N/A 3.297±0.50 N/A 0.416±0.00

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