C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006DO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198862-ENSG00000156253 CGP 9606 21:28928144-29019378
GeneTranscriptPositionBiotype
ENSG00000156253 (RWDD2B)
RWD domain containing 2B 		ENST00000286777 (RWDD2B-002) 29005759-29019352 processed_transcript
ENST00000466746 (RWDD2B-007) 29007876-29019306 retained_intron
ENST00000471269 (RWDD2B-005) 29008064-29019360 processed_transcript
ENST00000472184 (RWDD2B-003) 29005759-29019359 retained_intron
ENST00000481411 (RWDD2B-006) 29007900-29019340 retained_intron
ENST00000486719 (RWDD2B-004) 29005759-29019350 processed_transcript
ENST00000493196 (RWDD2B-001) 29004384-29019378 protein_coding
ENSG00000176054 (RPL23P2)
ribosomal protein L23 pseudogene 2 		ENST00000320371 (RPL23P2-001) 28997613-28998033 processed_pseudogene
ENSG00000198862 (LTN1)
listerin E3 ubiquitin protein ligase 1 		ENST00000361371 (LTN1-008) 28928144-28992885 protein_coding
ENST00000389194 (LTN1-001) 28928144-28992949 protein_coding
ENST00000389195 (LTN1-002) 28961317-28992949 protein_coding
ENST00000475344 (LTN1-005) 28958450-28960821 retained_intron
ENST00000483326 (LTN1-004) 28966895-28986761 nonsense_mediated_decay
ENST00000486427 (LTN1-006) 28958406-28959862 retained_intron
ENST00000614971 (LTN1-201) 28928144-28992956 protein_coding
CIL_0006DO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000052299-ENSMUSG00000041079 CGP 10090 16:87376651-87440573
GeneTranscriptPositionBiotype
ENSMUSG00000041079 (Rwdd2b)
RWD domain containing 2B 		ENSMUST00000039101 (Rwdd2b-001) 87433407-87440573 protein_coding
ENSMUST00000152430 (Rwdd2b-002) 87436696-87440573 processed_transcript
ENSMUSG00000052299 (Ltn1)
listerin E3 ubiquitin protein ligase 1 		ENSMUST00000039449 (Ltn1-201) 87376651-87432606 protein_coding
ENSMUSG00000065647 (Gm25896)
predicted gene, 25896 		ENSMUST00000083713 (Gm25896-201) 87418909-87419044 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006DO_0001ENSG00000156253ENST00000286777ENST00000466746ENST00000471269ENST00000472184ENST00000481411ENST00000486719ENST00000493196ENSG00000176054ENST00000320371ENSG00000198862ENST00000361371ENST00000389194ENST00000389195ENST00000475344ENST00000483326ENST00000486427ENST00000614971CIL_0006DO_0002ENSMUSG00000041079ENSMUST00000039101ENSMUST00000152430ENSMUSG00000052299ENSMUST00000039449ENSMUSG00000065647ENSMUST00000083713
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006DO_0001ENSG00000156253ENST00000286777ENST00000466746ENST00000471269ENST00000472184ENST00000486719ENST00000493196ENSG00000176054ENST00000320371ENSG00000198862ENST00000361371ENST00000389194ENST00000389195ENST00000483326ENST00000614971CIL_0006DO_0002ENSMUSG00000041079ENSMUST00000039101ENSMUSG00000052299ENSMUST00000039449ENSMUSG00000065647ENSMUST00000083713
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156253 ENST00000286777 N/A N/A N/A 0.696±0.00 N/A 0.392±0.00 0.793±0.24 N/A 2.147±0.00 0.945±0.00 3.418±0.00 2.277±1.37 3.477±0.34 4.492±1.44
ENST00000466746 N/A N/A 1.173±0.00 1.652±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471269 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.077±0.00 N/A 6.361±0.00 8.314±0.00 9.100±0.00
ENST00000472184 1.675±0.00 2.235±0.00 0.598±0.00 1.493±0.68 1.678±0.00 1.225±0.07 0.788±0.00 2.358±0.00 1.141±0.00 0.708±0.15 2.582±0.51 1.935±0.78 N/A N/A
ENST00000481411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486719 2.885±0.00 5.782±0.00 0.359±0.00 2.329±0.00 3.099±2.04 1.604±1.13 1.590±0.29 4.439±0.00 3.539±2.13 0.442±0.18 N/A 2.632±0.91 3.816±1.02 4.055±1.83
ENST00000493196 N/A N/A 0.311±0.00 0.888±0.00 N/A 0.447±0.00 0.431±0.00 1.121±0.47 N/A 0.325±0.00 2.084±0.00 0.610±0.21 1.286±0.64 2.067±0.00
ENSG00000176054 ENST00000320371 0.237±0.00 0.984±0.00 0.861±0.00 0.615±0.42 1.198±0.00 0.278±0.05 0.190±0.09 1.047±0.40 0.260±0.00 0.171±0.00 0.097±0.00 0.585±0.17 0.287±0.03 0.673±0.29
ENSG00000198862 ENST00000361371 2.305±0.00 0.413±0.00 1.577±0.00 3.063±1.14 2.374±0.83 1.226±0.01 2.050±0.02 2.007±0.84 2.847±2.42 2.024±1.05 1.860±1.15 2.103±2.51 0.765±0.23 N/A
ENST00000389194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.202±0.00
ENST00000389195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.776±0.00 N/A N/A 1.471±0.00
ENST00000475344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483326 N/A N/A 2.093±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.567±0.98
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041079 ENSMUST00000039101 2.067±0.51 1.183±0.25 1.900±0.08 2.442±0.19 2.064±0.54 4.258±0.51 1.460±0.18 6.195±0.31 3.033±0.82 1.542±0.33 0.785±0.18 1.629±0.72 2.403±1.22 0.905±0.20
ENSMUST00000152430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000052299 ENSMUST00000039449 5.424±1.58 2.142±0.87 3.280±2.21 5.221±0.57 2.814±1.12 1.530±0.42 1.757±0.27 3.664±0.87 2.178±0.94 3.262±0.13 3.014±0.83 3.855±2.10 4.758±2.23 4.980±2.79
ENSMUSG00000065647 ENSMUST00000083713 N/A N/A N/A N/A N/A N/A N/A N/A 3.936±0.00 N/A N/A N/A N/A N/A

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