C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006EW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000005104-ENSDARG00000003281 CGP 7955 5:22606737-22662855
GeneTranscriptPositionBiotype
ENSDARG00000003281 (pik3ip1)
phosphoinositide-3-kinase interacting protein 1 		ENSDART00000134697 (pik3ip1-001) 22649900-22662855 protein_coding
ENSDARG00000005104 (limk2)
LIM domain kinase 2 		ENSDART00000093185 (limk2-001) 22606737-22646702 protein_coding
ENSDART00000139260 (limk2-002) 22627305-22628751 retained_intron
ENSDART00000142894 (limk2-003) 22606791-22629315 protein_coding
CIL_0006EW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000182541-ENSG00000100100 CGP 9606 22:31212239-31292534
GeneTranscriptPositionBiotype
ENSG00000100100 (PIK3IP1)
phosphoinositide-3-kinase interacting protein 1 		ENST00000215912 (PIK3IP1-001) 31281593-31292528 protein_coding
ENST00000402249 (PIK3IP1-002) 31289038-31292479 protein_coding
ENST00000441972 (PIK3IP1-201) 31281613-31292534 protein_coding
ENST00000443175 (PIK3IP1-005) 31289641-31292488 protein_coding
ENST00000480654 (PIK3IP1-003) 31281594-31290754 retained_intron
ENST00000493034 (PIK3IP1-004) 31281679-31290726 retained_intron
ENSG00000182541 (LIMK2)
LIM domain kinase 2 		ENST00000331728 (LIMK2-001) 31212295-31280080 protein_coding
ENST00000333611 (LIMK2-004) 31248402-31279734 protein_coding
ENST00000340552 (LIMK2-003) 31248487-31277638 protein_coding
ENST00000406516 (LIMK2-002) 31212274-31277638 protein_coding
ENST00000425203 (LIMK2-005) 31248358-31258484 protein_coding
ENST00000462625 (LIMK2-006) 31212239-31259046 retained_intron
ENST00000465937 (LIMK2-007) 31258959-31266132 retained_intron
ENST00000467301 (LIMK2-008) 31272674-31278586 processed_transcript
ENST00000482270 (LIMK2-009) 31272471-31275665 retained_intron
ENSG00000199695 (RNU6-1128P)
RNA, U6 small nuclear 1128, pseudogene 		ENST00000362825 (RNU6-1128P-201) 31222745-31222853 snRNA
ENSG00000202019 (Y_RNA)
Y RNA 		ENST00000365149 (Y_RNA.1-523) 31230071-31230172 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006EW_0001ENSDARG00000003281ENSDART00000134697ENSDARG00000005104ENSDART00000093185ENSDART00000139260ENSDART00000142894CIL_0006EW_0002ENSG00000100100ENST00000215912ENST00000402249ENST00000441972ENST00000443175ENST00000480654ENST00000493034ENSG00000182541ENST00000331728ENST00000333611ENST00000340552ENST00000406516ENST00000425203ENST00000462625ENST00000465937ENST00000467301ENST00000482270ENSG00000199695ENST00000362825ENSG00000202019ENST00000365149
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006EW_0001ENSDARG00000003281ENSDART00000134697ENSDARG00000005104ENSDART00000093185CIL_0006EW_0002ENSG00000100100ENST00000215912ENST00000441972ENST00000443175ENST00000480654ENST00000493034ENSG00000182541ENST00000331728ENST00000333611ENST00000340552ENST00000406516ENST00000425203ENST00000462625ENST00000482270ENSG00000199695ENST00000362825ENSG00000202019ENST00000365149
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000003281 ENSDART00000134697 N/A N/A N/A 51.710±12.72 N/A N/A 22.782±21.56 8.388±5.48 0.634±0.00 N/A 68.399±0.00 N/A N/A N/A
ENSDARG00000005104 ENSDART00000093185 N/A N/A N/A 10.678±0.82 N/A N/A 2.459±1.02 17.052±2.03 4.612±0.00 N/A 2.351±0.00 N/A N/A N/A
ENSDART00000139260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100100 ENST00000215912 17.772±0.00 19.202±0.00 1.813±0.00 13.516±6.40 10.500±4.49 7.319±5.11 3.701±2.01 4.548±4.30 2.609±0.85 14.144±6.01 3.937±2.75 8.055±4.20 20.613±4.63 11.582±1.54
ENST00000402249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441972 3.985±0.00 8.618±0.00 0.255±0.00 N/A 8.166±0.00 1.695±0.78 2.227±0.00 0.123±0.00 0.543±0.00 14.125±0.00 2.612±0.00 4.480±0.00 3.070±0.67 4.273±0.97
ENST00000443175 N/A N/A N/A N/A N/A N/A N/A 2.659±0.00 N/A N/A N/A N/A N/A N/A
ENST00000480654 N/A N/A N/A N/A N/A N/A 0.281±0.00 N/A N/A 1.294±0.00 N/A N/A N/A N/A
ENST00000493034 N/A N/A N/A N/A N/A 1.085±0.00 N/A 0.144±0.00 1.936±0.00 N/A N/A 0.794±0.00 N/A N/A
ENSG00000182541 ENST00000331728 8.365±0.00 12.151±0.00 0.634±0.00 3.776±3.43 4.175±2.79 2.304±0.00 0.499±0.00 4.998±4.84 1.809±0.97 20.633±0.00 0.434±0.00 13.130±3.36 15.110±6.36 8.880±2.47
ENST00000333611 N/A N/A N/A 2.443±0.00 N/A N/A 0.484±0.00 0.172±0.00 1.134±0.00 7.264±0.00 N/A 8.375±0.00 15.723±8.21 N/A
ENST00000340552 N/A N/A N/A N/A N/A N/A 0.079±0.00 N/A N/A N/A N/A N/A 6.480±0.72 N/A
ENST00000406516 N/A N/A N/A N/A 1.055±0.00 2.381±0.05 0.510±0.40 0.554±0.00 0.834±0.00 9.280±0.00 1.575±0.00 10.022±0.00 10.483±0.00 5.719±0.00
ENST00000425203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.866±0.00 N/A N/A N/A
ENST00000462625 N/A N/A 0.941±0.00 N/A N/A N/A N/A N/A N/A 5.825±0.00 N/A 5.003±0.00 N/A N/A
ENST00000465937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482270 N/A N/A 1.406±0.00 N/A N/A N/A N/A N/A N/A N/A 1.618±0.00 N/A N/A N/A
ENSG00000199695 ENST00000362825 N/A N/A N/A N/A N/A N/A 0.386±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000202019 ENST00000365149 N/A 1.325±0.00 N/A N/A 0.742±0.00 0.531±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

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