C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006F7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000009621-ENSDARG00000036612 CGP 7955 6:301171-314397
GeneTranscriptPositionBiotype
ENSDARG00000009621 (cacng2b)
calcium channel, voltage-dependent, gamma subunit 2b
ENSDART00000013939 (cacng2b-201) 301171-311208 protein_coding
ENSDARG00000036612 (ift27)
intraflagellar transport 27 homolog (Chlamydomonas)
ENSDART00000053180 (ift27-201) 312002-314397 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0006F7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166862-ENSG00000100360 CGP 9606 22:36563921-36776256
GeneTranscriptPositionBiotype
ENSG00000166862 (CACNG2)
calcium channel, voltage-dependent, gamma subunit 2
ENST00000300105 (CACNG2-001) 36563921-36703558 protein_coding
ENST00000480002 (CACNG2-002) 36584489-36585454 processed_transcript
ENSG00000234688 (RP1-293L6.1)
ENST00000430281 (RP1-293L6.1-001) 36703918-36721472 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0006F7_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000019146-ENSMUSG00000016637 CGP 10090 15:77991748-78174108
GeneTranscriptPositionBiotype
ENSMUSG00000016637 (Ift27)
intraflagellar transport 27
ENSMUST00000016781 (Ift27-201) 78159465-78174108 protein_coding
ENSMUSG00000019146 (Cacng2)
calcium channel, voltage-dependent, gamma subunit 2
ENSMUST00000019290 (Cacng2-001) 77991748-78120028 protein_coding
ENSMUSG00000092375 (A730060N03Rik)
RIKEN cDNA A730060N03 gene
ENSMUST00000174277 (A730060N03Rik-001) 78119706-78144142 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006F7_0001ENSDARG00000009621ENSDART00000013939ENSDARG00000036612ENSDART00000053180CIL_0006F7_0002ENSG00000166862ENST00000300105ENST00000480002ENSG00000234688ENST00000430281CIL_0006F7_0003ENSMUSG00000016637ENSMUST00000016781ENSMUSG00000019146ENSMUST00000019290ENSMUSG00000092375ENSMUST00000174277
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006F7_0001ENSDARG00000009621ENSDART00000013939ENSDARG00000036612ENSDART00000053180CIL_0006F7_0002ENSG00000166862ENST00000300105ENST00000480002ENSG00000234688ENST00000430281CIL_0006F7_0003ENSMUSG00000016637ENSMUST00000016781ENSMUSG00000019146ENSMUST00000019290ENSMUSG00000092375ENSMUST00000174277
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000009621 ENSDART00000013939 N/A N/A N/A 44.070±0.00 N/A N/A N/A N/A 0.038±0.00 N/A 1.940±0.00 N/A N/A N/A
ENSDARG00000036612 ENSDART00000053180 N/A N/A N/A 10.818±0.32 N/A N/A 2.404±0.22 5.520±0.00 0.279±0.00 N/A 1.024±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166862 ENST00000300105 0.053±0.00 N/A N/A 0.406±0.00 N/A N/A N/A N/A N/A 0.006±0.00 0.006±0.00 N/A N/A 0.091±0.01
ENST00000480002 N/A N/A N/A 0.094±0.00 0.067±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000234688 ENST00000430281 0.283±0.00 N/A N/A 0.565±0.17 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.131±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000016637 ENSMUST00000016781 15.719±6.41 21.565±3.74 13.204±0.50 14.396±6.36 16.421±7.61 18.016±5.75 7.908±1.21 20.360±6.53 8.461±1.99 14.391±6.87 5.551±1.91 28.502±10.53 6.024±1.35 26.670±11.24
ENSMUSG00000019146 ENSMUST00000019290 N/A 0.121±0.04 0.003±0.00 6.571±4.86 N/A 0.011±0.00 0.008±0.00 0.010±0.00 0.007±0.01 0.012±0.00 0.007±0.00 0.011±0.01 0.003±0.00 0.030±0.01
ENSMUSG00000092375 ENSMUST00000174277 N/A 0.217±0.09 N/A N/A N/A N/A N/A 0.011±0.00 0.004±0.00 N/A 0.027±0.00 0.039±0.00 N/A 0.074±0.01

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