C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, gamma subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000300105 CACNG2-001 ENSG00000166862 9606 - 22:36563921-36703558 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainLungMuscleTestisENST00000300105
Transcript ID Adipose Brain Lung Muscle Testis
ENST00000300105 0.053±0.00 0.406±0.00 0.006±0.00 0.006±0.00 0.091±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005SO CIL_0005SO_0001 CGP 22:36510850-36703558
CIL_0006F7 CIL_0006F7_0002 CGP 22:36563921-36776256

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005245 IEA voltage-gated calcium channel activity
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0005891 IEA voltage-gated calcium channel complex
GO:0006810 TAS transport
GO:0007268 TAS synaptic transmission
GO:0007528 IEA neuromuscular junction development
GO:0016021 IEA integral component of membrane
GO:0019226 IEA transmission of nerve impulse
GO:0030666 TAS endocytic vesicle membrane
GO:0032281 ISS alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex
GO:0035255 IEA ionotropic glutamate receptor binding
GO:0042391 IEA regulation of membrane potential
GO:0050877 IEA neurological system process
GO:0051899 TAS membrane depolarization
GO:0060081 IEA membrane hyperpolarization
GO:0070588 IEA calcium ion transmembrane transport
GO:2000311 ISS regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019290 Cacng2-001 protein_coding Mus_musculus 0 1866

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