C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006FR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000076703-ENSDARG00000062532 CGP 7955 13:18068682-18171306
GeneTranscriptPositionBiotype
ENSDARG00000062532 (fam21c)
family with sequence similarity 21, member C 		ENSDART00000090475 (fam21c-201) 18122186-18168714 protein_coding
ENSDART00000128748 (fam21c-001) 18156468-18171306 protein_coding
ENSDART00000143223 (fam21c-003) 18125824-18137202 protein_coding
ENSDART00000148125 (fam21c-002) 18122184-18168669 protein_coding
ENSDARG00000076703 (zfand4)
zinc finger, AN1-type domain 4 		ENSDART00000109123 (zfand4-201) 18073298-18113447 protein_coding
ENSDART00000134477 (zfand4-001) 18094931-18118394 protein_coding
ENSDART00000146772 (zfand4-002) 18068682-18118394 protein_coding
CIL_0006FR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172671-ENSG00000172661 CGP 9606 10:45615501-45792964
GeneTranscriptPositionBiotype
ENSG00000172661 (FAM21C)
family with sequence similarity 21, member C 		ENST00000336378 (FAM21C-201) 45727236-45792961 protein_coding
ENST00000359860 (FAM21C-202) 45737432-45792964 protein_coding
ENST00000374359 (FAM21C-002) 45779016-45785963 retained_intron
ENST00000374362 (FAM21C-001) 45727219-45792961 protein_coding
ENST00000420848 (FAM21C-004) 45727288-45751553 protein_coding
ENST00000471102 (FAM21C-003) 45786370-45792601 retained_intron
ENST00000485850 (FAM21C-005) 45740191-45744943 retained_intron
ENST00000537517 (FAM21C-203) 45727200-45792961 protein_coding
ENST00000540872 (FAM21C-204) 45727200-45792961 protein_coding
ENST00000623400 (FAM21C-006) 45727264-45792936 protein_coding
ENSG00000172671 (ZFAND4)
zinc finger, AN1-type domain 4 		ENST00000335258 (ZFAND4-003) 45650125-45672780 processed_transcript
ENST00000344646 (ZFAND4-002) 45615595-45672348 protein_coding
ENST00000374366 (ZFAND4-201) 45615501-45672732 protein_coding
ENST00000374370 (ZFAND4-006) 45616385-45649779 processed_transcript
ENST00000374371 (ZFAND4-005) 45615599-45672752 protein_coding
ENST00000465407 (ZFAND4-004) 45639706-45672762 nonsense_mediated_decay
ENST00000484333 (ZFAND4-001) 45617765-45620927 processed_transcript
ENST00000495747 (ZFAND4-008) 45648419-45672275 nonsense_mediated_decay
ENST00000497028 (ZFAND4-007) 45648475-45672762 processed_transcript
ENSG00000228702 (RP11-671E7.1)
 ENST00000424552 (RP11-671E7.1-001) 45725694-45726038 processed_pseudogene
ENSG00000230869 (CTGLF10P)
centaurin, gamma-like family, member 10 pseudogene 		ENST00000454844 (CTGLF10P-001) 45678692-45700532 unprocessed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006FR_0001ENSDARG00000062532ENSDART00000090475ENSDART00000128748ENSDART00000143223ENSDART00000148125ENSDARG00000076703ENSDART00000109123ENSDART00000134477ENSDART00000146772CIL_0006FR_0002ENSG00000172661ENST00000336378ENST00000359860ENST00000374359ENST00000374362ENST00000420848ENST00000471102ENST00000485850ENST00000537517ENST00000540872ENST00000623400ENSG00000172671ENST00000335258ENST00000344646ENST00000374366ENST00000374370ENST00000374371ENST00000465407ENST00000484333ENST00000495747ENST00000497028ENSG00000228702ENST00000424552ENSG00000230869ENST00000454844
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006FR_0001ENSDARG00000062532ENSDART00000090475ENSDART00000143223ENSDART00000148125ENSDARG00000076703ENSDART00000109123ENSDART00000134477ENSDART00000146772CIL_0006FR_0002ENSG00000172661ENST00000336378ENST00000374359ENST00000374362ENST00000420848ENST00000471102ENST00000537517ENST00000540872ENST00000623400ENSG00000172671ENST00000335258ENST00000344646ENST00000374366ENST00000374370ENST00000374371ENST00000465407ENST00000484333ENST00000495747ENST00000497028ENSG00000228702ENST00000424552ENSG00000230869ENST00000454844
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000062532 ENSDART00000090475 N/A N/A N/A 2.814±0.02 N/A N/A N/A N/A N/A N/A 0.537±0.00 N/A N/A N/A
ENSDART00000128748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143223 N/A N/A N/A 5.737±0.00 N/A N/A 4.525±0.00 N/A N/A N/A 1.707±0.00 N/A N/A N/A
ENSDART00000148125 N/A N/A N/A 4.536±0.00 N/A N/A 4.204±1.63 7.323±0.00 0.187±0.00 N/A N/A N/A N/A N/A
ENSDARG00000076703 ENSDART00000109123 N/A N/A N/A 0.711±0.00 N/A N/A 0.822±0.00 0.761±0.00 0.024±0.00 N/A N/A N/A N/A N/A
ENSDART00000134477 N/A N/A N/A N/A N/A N/A N/A N/A 0.067±0.00 N/A N/A N/A N/A N/A
ENSDART00000146772 N/A N/A N/A 3.493±0.00 N/A N/A 1.642±0.78 0.562±0.00 0.078±0.00 N/A 0.596±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000172661 ENST00000336378 N/A N/A N/A N/A N/A N/A N/A 0.334±0.00 N/A N/A 0.466±0.00 1.175±0.00 N/A N/A
ENST00000359860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000374359 N/A N/A N/A N/A N/A N/A N/A 2.102±0.00 N/A N/A N/A N/A N/A N/A
ENST00000374362 N/A N/A N/A N/A N/A 0.498±0.00 0.374±0.00 N/A N/A 1.018±0.00 N/A N/A N/A N/A
ENST00000420848 N/A N/A N/A N/A N/A N/A N/A N/A 2.310±0.00 N/A 0.697±0.00 3.138±1.33 1.513±0.00 1.578±0.00
ENST00000471102 0.751±0.00 3.359±0.00 2.305±0.00 0.703±0.00 1.986±1.08 1.276±0.48 0.756±0.32 1.596±0.00 1.287±0.84 1.080±0.07 0.580±0.00 2.862±2.07 N/A 1.108±0.00
ENST00000485850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537517 1.830±0.00 2.388±0.00 N/A 0.993±0.46 1.561±0.02 1.286±0.58 0.610±0.31 2.238±0.00 0.606±0.00 1.650±0.00 1.577±0.00 2.379±1.79 2.405±0.74 2.384±0.84
ENST00000540872 0.631±0.00 N/A N/A 0.912±0.00 N/A N/A 0.303±0.00 N/A 0.524±0.00 0.534±0.00 N/A 0.459±0.00 0.646±0.00 N/A
ENST00000623400 N/A N/A 0.543±0.00 0.753±0.00 0.768±0.00 0.726±0.00 N/A 0.574±0.00 N/A N/A N/A 1.295±0.00 0.973±0.11 N/A
ENSG00000172671 ENST00000335258 N/A N/A N/A N/A 0.308±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000344646 N/A 0.368±0.00 0.418±0.00 0.373±0.03 0.690±0.00 0.742±0.01 N/A 0.958±0.00 0.580±0.25 N/A N/A 1.258±0.13 0.155±0.09 13.629±5.03
ENST00000374366 N/A N/A N/A N/A N/A N/A 0.185±0.00 N/A N/A N/A N/A 0.467±0.14 0.081±0.00 N/A
ENST00000374370 1.058±0.00 0.668±0.00 N/A 0.459±0.00 1.336±0.00 N/A 1.515±0.00 2.199±0.00 0.799±0.00 1.794±0.00 0.605±0.00 0.923±0.10 0.242±0.10 19.245±7.76
ENST00000374371 0.702±0.00 0.504±0.00 N/A 0.332±0.00 0.418±0.00 N/A 0.936±0.00 N/A N/A 0.581±0.00 N/A N/A N/A 5.486±0.00
ENST00000465407 N/A N/A N/A 0.493±0.00 1.655±0.00 1.704±0.00 N/A N/A 1.663±0.00 N/A N/A N/A N/A N/A
ENST00000484333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.472±0.00 N/A
ENST00000495747 N/A N/A 1.023±0.00 0.862±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497028 N/A N/A 1.293±0.00 1.031±0.00 N/A N/A 2.240±0.00 1.304±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000228702 ENST00000424552 N/A 0.103±0.00 N/A 0.107±0.00 0.158±0.00 N/A 0.048±0.00 N/A 0.285±0.00 N/A N/A 0.354±0.09 0.205±0.12 0.805±0.00
ENSG00000230869 ENST00000454844 0.026±0.00 0.048±0.00 0.094±0.00 0.074±0.00 0.058±0.01 0.055±0.01 0.011±0.00 0.051±0.03 0.015±0.00 0.024±0.01 N/A 0.079±0.07 0.075±0.04 0.674±0.47

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