C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424552 RP11-671E7.1-001 ENSG00000228702 9606 - 10:45725694-45726038 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartLiverOvaryPlacentaTestisENST00000424552
Transcript ID Adrenal Brain Breast Heart Liver Ovary Placenta Testis
ENST00000424552 0.103±0.00 0.107±0.00 0.158±0.00 0.048±0.00 0.285±0.00 0.354±0.09 0.205±0.12 0.805±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081B CIL_00081B_0001 VISTA 10:45257434-45860222
CIL_0006FR CIL_0006FR_0002 CGP 10:45615501-45792964

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118190 Fam103a1-002 protein_coding Mus_musculus 0 279
ENSMUST00000042166 Fam103a1-001 protein_coding Mus_musculus 0 279
ENSMUST00000178509 Gm9830-201 protein_coding Mus_musculus 0 279
ENSMUST00000099412 Gm10767-002 protein_coding Mus_musculus 0 241
ENSMUST00000168767 Gm10767-001 protein_coding Mus_musculus 0 241
ENSMUST00000133034 Fam103a1-003 protein_coding Mus_musculus 3e-23 111

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