C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006GC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135312-ENSG00000269964 CGP 9606 6:77462205-77926974
GeneTranscriptPositionBiotype
ENSG00000135312 (HTR1B)
5-hydroxytryptamine (serotonin) receptor 1B, G protein-coupled 		ENST00000369947 (HTR1B-001) 77462205-77463464 protein_coding
ENSG00000269964 (MEI4)
meiosis-specific 4 homolog (S. cerevisiae) 		ENST00000602452 (MEI4-001) 77690658-77926974 protein_coding
CIL_0006GC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049511-ENSMUSG00000043289 CGP 10090 9:81628291-82206007
GeneTranscriptPositionBiotype
ENSMUSG00000043289 (Mei4)
meiosis-specific, MEI4 homolog (S. cerevisiae) 		ENSMUST00000057067 (Mei4-001) 81863670-82027026 protein_coding
ENSMUST00000189391 (Mei4-002) 81863709-82026458 protein_coding
ENSMUST00000189832 (Mei4-004) 81863705-82206007 protein_coding
ENSMUSG00000049511 (Htr1b)
5-hydroxytryptamine (serotonin) receptor 1B 		ENSMUST00000051005 (Htr1b-201) 81631343-81632615 protein_coding
ENSMUST00000183482 (Htr1b-002) 81628291-81633828 protein_coding
ENSMUSG00000079225 (Gm9531)
predicted gene 9531 		ENSMUST00000055820 (Gm9531-002) 81677598-81678677 processed_transcript
ENSMUST00000183511 (Gm9531-001) 81677612-81678386 transcribed_processed_pseudogene
ENSMUST00000184573 (Gm9531-006) 81678292-81678677 retained_intron
ENSMUSG00000081273 (Gm15896)
predicted gene 15896 		ENSMUST00000118045 (Gm15896-001) 82202648-82203398 processed_pseudogene
ENSMUSG00000097241 (Gm26907)
predicted gene, 26907 		ENSMUST00000181794 (Gm26907-002) 81776695-81858891 antisense
ENSMUSG00000097466 (D430036J16Rik)
RIKEN cDNA D430036J16 gene 		ENSMUST00000180663 (D430036J16Rik-002) 81632358-81645085 antisense
ENSMUST00000181447 (D430036J16Rik-003) 81631930-81645156 antisense
ENSMUST00000181893 (D430036J16Rik-001) 81631551-81644629 antisense
ENSMUST00000183536 (D430036J16Rik-005) 81632033-81644195 antisense
ENSMUST00000183781 (D430036J16Rik-004) 81632418-81644352 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006GC_0001ENSG00000135312ENST00000369947ENSG00000269964ENST00000602452CIL_0006GC_0002ENSMUSG00000043289ENSMUST00000057067ENSMUST00000189391ENSMUST00000189832ENSMUSG00000049511ENSMUST00000051005ENSMUST00000183482ENSMUSG00000079225ENSMUST00000055820ENSMUST00000183511ENSMUST00000184573ENSMUSG00000081273ENSMUST00000118045ENSMUSG00000097241ENSMUST00000181794ENSMUSG00000097466ENSMUST00000180663ENSMUST00000181447ENSMUST00000181893ENSMUST00000183536ENSMUST00000183781
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006GC_0001ENSG00000135312ENST00000369947ENSG00000269964ENST00000602452CIL_0006GC_0002ENSMUSG00000043289ENSMUST00000057067ENSMUST00000189391ENSMUST00000189832ENSMUSG00000049511ENSMUST00000051005ENSMUST00000183482ENSMUSG00000079225ENSMUST00000055820ENSMUST00000183511ENSMUST00000184573ENSMUSG00000081273ENSMUST00000118045ENSMUSG00000097241ENSMUST00000181794ENSMUSG00000097466ENSMUST00000180663ENSMUST00000181447ENSMUST00000181893ENSMUST00000183536ENSMUST00000183781
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135312 ENST00000369947 0.112±0.00 N/A 0.265±0.00 0.531±0.12 0.701±0.43 0.391±0.06 N/A 0.434±0.00 N/A 0.186±0.08 0.199±0.00 0.221±0.15 1.515±0.56 0.626±0.19
ENSG00000269964 ENST00000602452 0.016±0.00 0.042±0.00 0.633±0.00 0.027±0.01 0.026±0.00 0.008±0.00 0.155±0.08 0.420±0.36 0.043±0.00 N/A N/A 0.012±0.01 0.006±0.00 0.678±0.32
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000043289 ENSMUST00000057067 0.108±0.00 0.214±0.09 N/A 0.122±0.01 0.124±0.06 N/A 0.015±0.00 0.090±0.09 0.104±0.03 0.100±0.03 0.020±0.00 0.018±0.00 0.052±0.02 0.112±0.03
ENSMUST00000189391 0.052±0.03 N/A 0.009±0.00 0.069±0.02 0.144±0.00 N/A N/A 0.060±0.04 0.054±0.01 N/A 0.014±0.00 0.053±0.03 0.041±0.02 0.027±0.00
ENSMUST00000189832 N/A 0.240±0.00 N/A N/A N/A 0.058±0.00 N/A N/A N/A 0.073±0.04 N/A N/A N/A N/A
ENSMUSG00000049511 ENSMUST00000051005 N/A 0.149±0.02 N/A N/A 0.036±0.02 0.038±0.00 0.025±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183482 0.120±0.11 0.156±0.02 0.232±0.03 0.444±0.16 0.036±0.01 0.083±0.05 0.037±0.00 0.146±0.01 0.007±0.00 0.205±0.02 0.016±0.00 0.237±0.16 0.058±0.02 0.094±0.09
ENSMUSG00000079225 ENSMUST00000055820 N/A N/A N/A N/A N/A N/A N/A N/A 1.565±0.00 N/A N/A 0.144±0.00 0.195±0.21 0.033±0.00
ENSMUST00000183511 0.356±0.15 N/A 0.589±0.00 0.776±0.07 0.664±0.31 0.328±0.20 0.278±0.26 0.289±0.17 1.451±1.11 0.566±0.13 0.117±0.07 1.201±0.78 0.129±0.12 0.725±0.40
ENSMUST00000184573 0.280±0.12 N/A N/A N/A 0.646±0.00 N/A 0.170±0.00 0.166±0.00 N/A 0.221±0.04 0.243±0.05 N/A N/A 0.486±0.18
ENSMUSG00000081273 ENSMUST00000118045 0.176±0.00 0.706±0.00 N/A N/A 0.362±0.08 0.321±0.00 0.116±0.00 0.154±0.00 0.246±0.08 N/A N/A 0.725±0.26 0.122±0.00 N/A
ENSMUSG00000097241 ENSMUST00000181794 N/A N/A 0.012±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.01
ENSMUSG00000097466 ENSMUST00000180663 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.296±0.00 N/A 0.650±0.00 N/A N/A
ENSMUST00000181447 N/A N/A N/A 0.293±0.00 N/A N/A N/A N/A 0.104±0.03 N/A N/A 0.271±0.10 N/A N/A
ENSMUST00000181893 0.562±0.11 0.333±0.20 0.182±0.00 0.970±0.49 0.117±0.03 0.185±0.08 0.151±0.10 1.013±0.25 0.010±0.00 0.416±0.26 0.036±0.00 0.944±0.46 0.052±0.02 0.025±0.00
ENSMUST00000183536 0.500±0.00 N/A N/A N/A 0.215±0.00 N/A N/A N/A N/A N/A 0.066±0.00 0.711±0.24 N/A N/A
ENSMUST00000183781 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.824±0.00 N/A 1.140±0.30 N/A N/A

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