C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15896
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118045 Gm15896-001 ENSMUSG00000081273 10090 + 9:82202648-82203398 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverOvaryPlacentaENSMUST00000118045
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Ovary Placenta
ENSMUST00000118045 0.176±0.00 0.706±0.00 0.362±0.08 0.321±0.00 0.116±0.00 0.154±0.00 0.246±0.08 0.725±0.26 0.122±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GC CIL_0006GC_0002 CGP 9:81628291-82206007
CIL_0006GD CIL_0006GD_0002 CGP 9:81863670-82847687

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000057944 rpl26-001 protein_coding Danio_rerio 0 246
ENST00000293842 RPL26-001 protein_coding Homo_sapiens 0 424
ENST00000414397 RP11-524O24.2-001 processed_pseudogene Homo_sapiens 0 296
ENST00000416146 AC017078.1-001 processed_pseudogene Homo_sapiens 0 213
ENST00000424037 RP11-416L21.1-001 processed_pseudogene Homo_sapiens 0 340
ENST00000431047 AC005534.6-001 processed_pseudogene Homo_sapiens 0 329
ENST00000450941 AC022431.1-001 processed_pseudogene Homo_sapiens 0 407
ENST00000451325 RP11-445P17.5-001 processed_pseudogene Homo_sapiens 0 291
ENST00000463604 RPL26P31-001 processed_pseudogene Homo_sapiens 0 270
ENST00000472981 RP11-796G6.1-001 processed_pseudogene Homo_sapiens 0 424
ENST00000495104 RP11-366M4.2-001 processed_pseudogene Homo_sapiens 0 370
ENST00000495560 AC090453.1-001 processed_pseudogene Homo_sapiens 0 226
ENST00000578115 RPL26-002 retained_intron Homo_sapiens 0 198
ENST00000578812 RPL26-003 protein_coding Homo_sapiens 0 331
ENST00000582471 KRBA2-001 nonsense_mediated_decay Homo_sapiens 0 331
ENST00000582485 RPL26-013 protein_coding Homo_sapiens 0 337
ENST00000582556 RPL26-005 protein_coding Homo_sapiens 0 424
ENST00000583011 RPL26-007 protein_coding Homo_sapiens 0 424
ENST00000583515 RPL26-006 protein_coding Homo_sapiens 0 302
ENST00000584164 RPL26-004 protein_coding Homo_sapiens 0 424
ENST00000584343 RPL26-008 protein_coding Homo_sapiens 0 346
ENST00000584906 RPL26-010 nonsense_mediated_decay Homo_sapiens 0 195

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