C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006KV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000006923-ENSDARG00000086881 CGP 7955 11:31693397-31914898
GeneTranscriptPositionBiotype
ENSDARG00000006923 (cacna1ab)
calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b 		ENSDART00000008139 (cacna1ab-201) 31781427-31900366 protein_coding
ENSDART00000148949 (cacna1ab-004) 31857231-31897252 protein_coding
ENSDART00000149273 (cacna1ab-003) 31847488-31873286 processed_transcript
ENSDART00000149597 (cacna1ab-002) 31836197-31857276 protein_coding
ENSDART00000149943 (cacna1ab-005) 31890973-31900026 processed_transcript
ENSDART00000150130 (cacna1ab-001) 31693397-31900366 protein_coding
ENSDARG00000086881 (IER2)
immediate early response 2 		ENSDART00000127355 (IER2-201) 31914386-31914898 protein_coding
CIL_0006KV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034656-ENSMUSG00000053560 CGP 10090 8:84388440-84662852
GeneTranscriptPositionBiotype
ENSMUSG00000034656 (Cacna1a)
calcium channel, voltage-dependent, P/Q type, alpha 1A subunit 		ENSMUST00000121390 (Cacna1a-001) 84415364-84640246 protein_coding
ENSMUST00000122053 (Cacna1a-002) 84415377-84640063 protein_coding
ENSMUST00000126302 (Cacna1a-006) 84571797-84580462 retained_intron
ENSMUST00000129620 (Cacna1a-004) 84547094-84554084 processed_transcript
ENSMUST00000130507 (Cacna1a-009) 84638991-84639434 processed_transcript
ENSMUST00000135382 (Cacna1a-003) 84388440-84519039 retained_intron
ENSMUST00000141981 (Cacna1a-008) 84601444-84613042 retained_intron
ENSMUST00000143215 (Cacna1a-007) 84601431-84612080 retained_intron
ENSMUST00000144879 (Cacna1a-005) 84601470-84634524 retained_intron
ENSMUST00000153691 (Cacna1a-010) 84601973-84617897 processed_transcript
ENSMUSG00000053560 (Ier2)
immediate early response 2 		ENSMUST00000060427 (Ier2-201) 84661331-84662852 protein_coding
ENSMUSG00000086067 (Gm16183)
predicted gene 16183 		ENSMUST00000127527 (Gm16183-001) 84611202-84617184 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006KV_0001ENSDARG00000006923ENSDART00000008139ENSDART00000148949ENSDART00000149273ENSDART00000149597ENSDART00000149943ENSDART00000150130ENSDARG00000086881ENSDART00000127355CIL_0006KV_0002ENSMUSG00000034656ENSMUST00000121390ENSMUST00000122053ENSMUST00000126302ENSMUST00000129620ENSMUST00000130507ENSMUST00000135382ENSMUST00000141981ENSMUST00000143215ENSMUST00000144879ENSMUST00000153691ENSMUSG00000053560ENSMUST00000060427ENSMUSG00000086067ENSMUST00000127527
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006KV_0001ENSDARG00000006923ENSDART00000008139ENSDART00000148949ENSDART00000150130ENSDARG00000086881ENSDART00000127355CIL_0006KV_0002ENSMUSG00000034656ENSMUST00000121390ENSMUST00000122053ENSMUST00000130507ENSMUST00000141981ENSMUST00000144879ENSMUSG00000053560ENSMUST00000060427ENSMUSG00000086067ENSMUST00000127527
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006923 ENSDART00000008139 N/A N/A N/A 1.359±0.00 N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A N/A
ENSDART00000148949 N/A N/A N/A N/A N/A N/A 0.113±0.00 N/A 0.018±0.00 N/A N/A N/A N/A N/A
ENSDART00000149273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149943 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150130 N/A N/A N/A 2.586±0.00 N/A N/A 0.121±0.00 0.158±0.00 N/A N/A 0.061±0.00 N/A N/A N/A
ENSDARG00000086881 ENSDART00000127355 N/A N/A N/A 7.068±3.82 N/A N/A 3.423±0.55 0.282±0.00 0.138±0.00 N/A 39.073±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034656 ENSMUST00000121390 0.542±0.12 0.147±0.01 0.352±0.00 10.118±6.24 0.634±0.15 0.843±0.35 0.167±0.07 0.181±0.12 0.064±0.03 0.336±0.16 0.106±0.02 0.544±0.03 0.152±0.09 N/A
ENSMUST00000122053 N/A 0.789±0.37 N/A 9.203±0.00 0.360±0.00 0.812±0.20 0.126±0.04 0.094±0.00 0.061±0.03 0.157±0.04 0.095±0.00 1.419±0.59 N/A 1.060±0.20
ENSMUST00000126302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130507 N/A 22.305±5.78 N/A N/A N/A N/A N/A N/A 1.625±0.16 N/A N/A 80.788±16.78 4.480±0.00 N/A
ENSMUST00000135382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141981 N/A N/A N/A N/A 0.905±0.00 N/A 0.602±0.03 N/A N/A N/A 0.413±0.14 1.931±0.00 1.809±0.00 N/A
ENSMUST00000143215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144879 N/A N/A N/A N/A 0.757±0.00 N/A N/A N/A 0.079±0.01 0.618±0.06 0.298±0.00 N/A 0.216±0.16 N/A
ENSMUST00000153691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000053560 ENSMUST00000060427 7.349±1.81 7.042±2.09 10.345±1.52 4.097±1.10 8.290±4.57 19.380±1.74 3.311±0.58 3.058±0.30 6.557±1.66 17.037±2.46 3.348±0.74 9.466±5.97 10.754±2.89 1.355±0.48
ENSMUSG00000086067 ENSMUST00000127527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.385±0.25 N/A

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