C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000150130 cacna1ab-001 ENSDARG00000006923 7955 + 11:31693397-31900366 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000150130
Transcript ID Brain Heart Kidney Muscle
ENSDART00000150130 2.586±0.00 0.121±0.00 0.158±0.00 0.061±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KV CIL_0006KV_0001 CGP 11:31693397-31914898

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121390 Cacna1a-001 protein_coding Mus_musculus 0 1321
ENSMUST00000122053 Cacna1a-002 protein_coding Mus_musculus 0 1321
ENSMUST00000126302 Cacna1a-006 retained_intron Mus_musculus 0 248
ENST00000360228 CACNA1A-001 protein_coding Homo_sapiens 0 1325
ENST00000573710 CACNA1A-002 protein_coding Homo_sapiens 0 1447
ENST00000585802 CACNA1A-012 protein_coding Homo_sapiens 0 1225
ENST00000587525 CACNA1A-013 protein_coding Homo_sapiens 0 989
ENST00000614285 CACNA1A-201 protein_coding Homo_sapiens 0 1303

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