C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 2991
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173338 Gm2991-001 ENSMUSG00000092454 10090 - 15:65928454-65928933 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungPlacentaTestisENSMUST00000173338
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Placenta Testis
ENSMUST00000173338 0.075±0.00 0.238±0.09 0.024±0.00 0.011±0.00 0.067±0.00 0.139±0.00 0.073±0.01 0.069±0.00 0.111±0.09 0.082±0.01 0.092±0.00 0.192±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006P8 CIL_0006P8_0003 CGP 15:65876053-65976804
CIL_0006FU CIL_0006FU_0003 CGP 15:65922443-66286224

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000244520 SNRPC-001 protein_coding Homo_sapiens 0 577
ENST00000374017 SNRPC-002 protein_coding Homo_sapiens 0 562
ENST00000374018 SNRPC-003 protein_coding Homo_sapiens 0 521
ENST00000417250 SNRPCP9-001 processed_pseudogene Homo_sapiens 4.2039e-45 183
ENST00000424055 SNRPCP15-001 processed_pseudogene Homo_sapiens 2.00386e-43 178
ENST00000433292 SNRPCP1-001 processed_pseudogene Homo_sapiens 0 294
ENST00000474635 SNRPC-004 processed_transcript Homo_sapiens 0 429
ENST00000481033 SNRPCP10-001 processed_pseudogene Homo_sapiens 0 206
ENST00000492453 SNRPCP11-001 processed_pseudogene Homo_sapiens 4.2039e-45 183
ENST00000514820 SNRPCP8-001 processed_pseudogene Homo_sapiens 0 196
ENST00000520330 SNRPCP17-001 processed_pseudogene Homo_sapiens 7.00649e-43 176
ENST00000524498 SNRPCP14-001 processed_pseudogene Homo_sapiens 5.04467e-44 180
ENST00000528310 SNRPCP6-001 processed_pseudogene Homo_sapiens 0 200
ENST00000531775 SNRPCP5-001 processed_pseudogene Homo_sapiens 5.04467e-44 180
ENST00000588011 SNRPCP20-001 processed_pseudogene Homo_sapiens 9.99995e-41 169
ENST00000622868 RP11-90D4.4-001 processed_pseudogene Homo_sapiens 0 206

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