C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HERV-H LTR-associating 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100584 Hhla1-001 ENSMUSG00000072511 10090 - 15:65922443-65976804 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyOvaryPlacentaTestisENSMUST00000100584
Transcript ID Brain Kidney Ovary Placenta Testis
ENSMUST00000100584 0.011±0.00 0.023±0.01 0.106±0.05 0.011±0.00 0.050±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006P8 CIL_0006P8_0003 CGP 15:65876053-65976804
CIL_0006FU CIL_0006FU_0003 CGP 15:65922443-66286224

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000414222 HHLA1-201 protein_coding Homo_sapiens 0 488
ENST00000434736 HHLA1-001 protein_coding Homo_sapiens 0 488

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