C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 98, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028825 Fam98b-001 ENSMUSG00000027349 10090 + 2:117249739-117271540 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028825
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028825 4.675±1.64 5.869±0.93 7.450±1.09 20.471±4.44 2.550±0.79 3.509±0.75 4.056±1.30 5.115±1.02 6.501±4.25 4.319±0.51 8.863±0.31 8.376±7.35 10.750±5.76 6.999±0.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006QP CIL_0006QP_0002 CGP 2:117121374-117271540
CIL_0002RQ CIL_0002RQ_0002 CGP 2:117249739-117343001

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding
GO:0072669 ISS tRNA-splicing ligase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000305752 FAM98B-003 retained_intron Homo_sapiens 0 361
ENST00000397609 FAM98B-001 protein_coding Homo_sapiens 0 1306
ENST00000491535 FAM98B-002 protein_coding Homo_sapiens 0 959

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