C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006RR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000186462-ENSG00000131264 CGP 9606 X:73212299-73455245
GeneTranscriptPositionBiotype
ENSG00000131264 (CDX4)
caudal type homeobox 4 		ENST00000373514 (CDX4-001) 73447254-73455245 protein_coding
ENSG00000186462 (NAP1L2)
nucleosome assembly protein 1-like 2 		ENST00000373517 (NAP1L2-001) 73212299-73214848 protein_coding
ENSG00000230311 (TOMM20P4)
translocase of outer mitochondrial membrane 20 homolog (yeast) pseudogene 4 		ENST00000427861 (TOMM20P4-001) 73223124-73223558 processed_pseudogene
ENSG00000237014 (AC004074.4)
 ENST00000421810 (AC004074.4-001) 73237647-73238709 processed_pseudogene
CIL_0006RR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000082229-ENSMUSG00000031326 CGP 10090 X:103184176-103330592
GeneTranscriptPositionBiotype
ENSMUSG00000031325 (4930519F16Rik)
RIKEN cDNA 4930519F16 gene 		ENSMUST00000033688 (4930519F16Rik-001) 103182971-103256614 processed_transcript
ENSMUST00000127012 (4930519F16Rik-002) 103230028-103311782 processed_transcript
ENSMUST00000133491 (4930519F16Rik-003) 103231382-103256606 retained_intron
ENSMUST00000182224 (4930519F16Rik-005) 103230094-103253047 processed_transcript
ENSMUST00000182605 (4930519F16Rik-007) 103232922-103298310 processed_transcript
ENSMUST00000183292 (4930519F16Rik-008) 103230028-103256614 unitary_pseudogene
ENSMUST00000183315 (4930519F16Rik-004) 103232933-103288078 processed_transcript
ENSMUSG00000031326 (Cdx4)
caudal type homeobox 4 		ENSMUST00000033689 (Cdx4-001) 103321398-103330592 protein_coding
ENSMUSG00000080886 (Gm14847)
predicted gene 14847 		ENSMUST00000121978 (Gm14847-001) 103236125-103236643 processed_pseudogene
ENSMUSG00000082229 (Nap1l2)
nucleosome assembly protein 1-like 2 		ENSMUST00000121720 (Nap1l2-001) 103184176-103186640 protein_coding
ENSMUSG00000083763 (Gm9050)
predicted gene 9050 		ENSMUST00000119501 (Gm9050-001) 103227705-103228152 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006RR_0001ENSG00000131264ENST00000373514ENSG00000186462ENST00000373517ENSG00000230311ENST00000427861ENSG00000237014ENST00000421810CIL_0006RR_0002ENSMUSG00000031325ENSMUST00000033688ENSMUST00000127012ENSMUST00000133491ENSMUST00000182224ENSMUST00000182605ENSMUST00000183292ENSMUST00000183315ENSMUSG00000031326ENSMUST00000033689ENSMUSG00000080886ENSMUST00000121978ENSMUSG00000082229ENSMUST00000121720ENSMUSG00000083763ENSMUST00000119501
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006RR_0001ENSG00000131264ENST00000373514ENSG00000186462ENST00000373517ENSG00000230311ENST00000427861ENSG00000237014ENST00000421810CIL_0006RR_0002ENSMUSG00000031325ENSMUST00000033688ENSMUST00000127012ENSMUST00000133491ENSMUST00000182605ENSMUST00000183292ENSMUST00000183315ENSMUSG00000031326ENSMUST00000033689ENSMUSG00000080886ENSMUST00000121978ENSMUSG00000082229ENSMUST00000121720ENSMUSG00000083763ENSMUST00000119501
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131264 ENST00000373514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.008±0.00
ENSG00000186462 ENST00000373517 0.339±0.00 1.393±0.00 2.152±0.00 40.595±4.55 0.705±0.09 1.871±0.94 1.101±0.55 3.116±2.19 1.089±0.91 0.482±0.05 0.243±0.03 1.083±0.92 0.130±0.03 1.308±0.54
ENSG00000230311 ENST00000427861 N/A 0.033±0.00 N/A N/A N/A 0.031±0.00 0.029±0.00 N/A N/A N/A 0.086±0.00 N/A 0.054±0.00 N/A
ENSG00000237014 ENST00000421810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.052±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031325 ENSMUST00000033688 N/A N/A N/A 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.201±0.55
ENSMUST00000127012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.140±0.00 0.009±0.00 N/A
ENSMUST00000133491 N/A N/A N/A 0.004±0.00 N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 0.002±0.00 N/A
ENSMUST00000182224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182605 0.184±0.00 0.280±0.00 0.065±0.03 0.176±0.11 0.408±0.00 N/A N/A 0.196±0.07 0.124±0.12 N/A N/A 0.625±0.13 0.199±0.12 N/A
ENSMUST00000183292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.617±0.50 N/A 3.888±1.86
ENSMUST00000183315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.059±0.00 N/A N/A
ENSMUSG00000031326 ENSMUST00000033689 N/A 0.039±0.00 N/A 0.004±0.00 N/A N/A N/A 0.050±0.01 0.104±0.07 N/A N/A N/A N/A N/A
ENSMUSG00000080886 ENSMUST00000121978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 0.194±0.00
ENSMUSG00000082229 ENSMUST00000121720 0.122±0.01 0.975±0.25 0.134±0.01 26.927±14.17 N/A 0.107±0.05 0.044±0.01 0.019±0.00 0.018±0.01 0.129±0.06 0.012±0.00 6.675±4.76 0.041±0.03 0.056±0.01
ENSMUSG00000083763 ENSMUST00000119501 N/A N/A N/A 0.052±0.00 N/A N/A N/A N/A N/A N/A N/A 0.290±0.13 N/A 0.097±0.00

Loading