C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006SF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000077265-ENSDARG00000060534 CGP 7955 13:37866391-37917072
GeneTranscriptPositionBiotype
ENSDARG00000060534 (sgpp1)
sphingosine-1-phosphate phosphatase 1 		ENSDART00000141420 (sgpp1-001) 37889102-37917072 protein_coding
ENSDARG00000077265 (WDR89)
WD repeat domain 89 		ENSDART00000114136 (WDR89-001) 37866391-37872287 protein_coding
CIL_0006SF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140006-ENSG00000126821 CGP 9606 14:63597039-63728039
GeneTranscriptPositionBiotype
ENSG00000126821 (SGPP1)
sphingosine-1-phosphate phosphatase 1 		ENST00000247225 (SGPP1-001) 63684214-63728039 protein_coding
ENSG00000140006 (WDR89)
WD repeat domain 89 		ENST00000267522 (WDR89-001) 63598502-63641407 protein_coding
ENST00000394942 (WDR89-003) 63597039-63641861 protein_coding
ENST00000554717 (WDR89-004) 63599263-63641853 protein_coding
ENST00000620954 (WDR89-201) 63597040-63599974 protein_coding
ENSG00000200693 (U3)
Small nucleolar RNA U3 		ENST00000363823 (U3.1-211) 63651296-63651499 snoRNA
ENSG00000206822 (Y_RNA)
Y RNA 		ENST00000384095 (Y_RNA.1-637) 63621760-63621871 misc_RNA
ENSG00000207172 (RNU6-1162P)
RNA, U6 small nuclear 1162, pseudogene 		ENST00000384443 (RNU6-1162P-201) 63630678-63630781 snRNA
ENSG00000258645 (HSPE1P2)
heat shock 10kDa protein 1 pseudogene 2 		ENST00000554777 (HSPE1P2-001) 63601509-63601814 processed_pseudogene
ENSG00000258800 (CTD-2302E22.2)
 ENST00000553983 (CTD-2302E22.2-001) 63598874-63599248 lincRNA
ENSG00000274015 (CTD-2302E22.6)
 ENST00000620835 (CTD-2302E22.6-001) 63642143-63642696 lincRNA
CIL_0006SF_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045690-ENSMUSG00000021054 CGP 10090 12:75630596-75735729
GeneTranscriptPositionBiotype
ENSMUSG00000021054 (Sgpp1)
sphingosine-1-phosphate phosphatase 1 		ENSMUST00000021450 (Sgpp1-201) 75714248-75735729 protein_coding
ENSMUSG00000045690 (Wdr89)
WD repeat domain 89 		ENSMUST00000062370 (Wdr89-001) 75630596-75669537 protein_coding
ENSMUST00000187307 (Wdr89-002) 75631397-75669527 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006SF_0001ENSDARG00000060534ENSDART00000141420ENSDARG00000077265ENSDART00000114136CIL_0006SF_0002ENSG00000126821ENST00000247225ENSG00000140006ENST00000267522ENST00000394942ENST00000554717ENST00000620954ENSG00000200693ENST00000363823ENSG00000206822ENST00000384095ENSG00000207172ENST00000384443ENSG00000258645ENST00000554777ENSG00000258800ENST00000553983ENSG00000274015ENST00000620835CIL_0006SF_0003ENSMUSG00000021054ENSMUST00000021450ENSMUSG00000045690ENSMUST00000062370ENSMUST00000187307
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006SF_0001ENSDARG00000060534ENSDART00000141420ENSDARG00000077265ENSDART00000114136CIL_0006SF_0002ENSG00000126821ENST00000247225ENSG00000140006ENST00000267522ENST00000394942ENST00000554717ENST00000620954ENSG00000200693ENST00000363823ENSG00000206822ENST00000384095ENSG00000207172ENST00000384443ENSG00000258645ENST00000554777ENSG00000258800ENST00000553983ENSG00000274015ENST00000620835CIL_0006SF_0003ENSMUSG00000021054ENSMUST00000021450ENSMUSG00000045690ENSMUST00000062370ENSMUST00000187307
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000060534 ENSDART00000141420 N/A N/A N/A 2.446±0.28 N/A N/A 1.083±0.46 1.048±0.29 0.555±0.00 N/A 0.599±0.00 N/A N/A N/A
ENSDARG00000077265 ENSDART00000114136 N/A N/A N/A 1.132±0.28 N/A N/A 1.272±0.38 1.067±0.37 1.450±0.00 N/A 1.201±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000126821 ENST00000247225 4.445±0.00 4.761±0.00 3.397±0.00 6.352±1.88 3.610±0.76 2.870±0.33 1.233±0.66 9.250±6.14 4.762±2.91 4.146±0.16 0.997±0.13 3.702±0.70 9.503±2.10 4.788±1.54
ENSG00000140006 ENST00000267522 N/A N/A 0.629±0.00 1.627±0.00 N/A N/A 0.373±0.00 0.883±0.00 N/A 1.353±0.00 1.092±0.00 2.198±0.00 0.622±0.00 N/A
ENST00000394942 N/A N/A N/A N/A 1.233±0.00 N/A N/A 0.873±0.43 N/A 0.248±0.00 N/A 1.660±0.00 N/A 1.112±0.00
ENST00000554717 N/A N/A N/A N/A 1.550±0.00 N/A 0.305±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000620954 0.240±0.00 2.506±0.00 N/A 0.587±0.00 0.246±0.00 1.026±0.00 0.264±0.02 0.554±0.27 1.415±0.34 1.137±0.00 1.477±0.00 2.666±0.77 1.629±0.41 1.971±1.15
ENSG00000200693 ENST00000363823 0.088±0.00 0.363±0.00 N/A 0.578±0.00 0.551±0.00 2.442±0.94 1.145±0.00 3.052±0.00 0.554±0.00 1.939±0.00 0.779±0.00 6.190±4.98 1.214±0.72 0.754±0.51
ENSG00000206822 ENST00000384095 N/A 0.941±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.843±0.00 N/A N/A
ENSG00000207172 ENST00000384443 0.932±0.00 N/A N/A 0.263±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258645 ENST00000554777 N/A 0.044±0.00 0.691±0.00 N/A N/A N/A N/A 0.318±0.00 N/A N/A N/A 0.187±0.04 N/A 0.076±0.00
ENSG00000258800 ENST00000553983 N/A N/A N/A 10.288±0.00 N/A N/A 1.332±0.00 N/A N/A N/A N/A 35.221±0.00 21.867±0.00 13.963±6.22
ENSG00000274015 ENST00000620835 N/A 0.046±0.00 0.162±0.00 0.083±0.03 0.112±0.00 0.604±0.00 0.201±0.00 0.162±0.00 0.143±0.00 0.133±0.03 N/A 0.242±0.17 N/A 0.394±0.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021054 ENSMUST00000021450 15.589±7.25 160.493±21.64 12.201±0.75 4.731±0.65 29.429±9.69 22.902±2.88 10.602±0.63 51.117±3.29 19.003±9.00 27.174±1.57 4.995±0.40 41.021±15.98 6.407±2.30 11.768±4.68
ENSMUSG00000045690 ENSMUST00000062370 1.795±0.55 4.052±0.88 2.085±0.08 1.015±0.42 1.942±0.81 2.822±1.85 1.174±0.40 2.620±1.00 3.145±0.92 1.870±0.27 0.380±0.05 2.133±1.11 1.399±0.67 1.056±0.62
ENSMUST00000187307 N/A N/A N/A 0.423±0.00 0.670±0.00 N/A N/A N/A N/A N/A 0.115±0.00 N/A 0.641±0.22 0.032±0.00

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