C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sphingosine-1-phosphate phosphatase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000247225 SGPP1-001 ENSG00000126821 9606 - 14:63684214-63728039 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000247225
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000247225 4.445±0.00 4.761±0.00 3.397±0.00 6.352±1.88 3.610±0.76 2.870±0.33 1.233±0.66 9.250±6.14 4.762±2.91 4.146±0.16 0.997±0.13 3.702±0.70 9.503±2.10 4.788±1.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SF CIL_0006SF_0002 CGP 14:63597039-63728039
CIL_0004WO CIL_0004WO_0001 CGP 14:63684214-64226433

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005783 IEA endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006665 TAS sphingolipid metabolic process
GO:0006668 IEA sphinganine-1-phosphate metabolic process
GO:0006670 IEA sphingosine metabolic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016311 IEA dephosphorylation
GO:0030148 TAS sphingolipid biosynthetic process
GO:0042392 IEA sphingosine-1-phosphate phosphatase activity
GO:0044281 TAS small molecule metabolic process
GO:0097191 IEA extrinsic apoptotic signaling pathway
GO:0097193 IEA intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021450 Sgpp1-201 protein_coding Mus_musculus 0 1797

Loading