C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 89
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000062370 Wdr89-001 ENSMUSG00000045690 10090 - 12:75630596-75669537 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062370
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062370 1.795±0.55 4.052±0.88 2.085±0.08 1.015±0.42 1.942±0.81 2.822±1.85 1.174±0.40 2.620±1.00 3.145±0.92 1.870±0.27 0.380±0.05 2.133±1.11 1.399±0.67 1.056±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SG CIL_0006SG_0003 CGP 12:75450883-75669537
CIL_0006SF CIL_0006SF_0003 CGP 12:75630596-75735729

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000321153 RPLP2-001 protein_coding Homo_sapiens 0 510
ENST00000398220 RPLP2P1-001 processed_pseudogene Homo_sapiens 0 200
ENST00000460082 CTB-47B8.1-001 processed_pseudogene Homo_sapiens 0 313
ENST00000474540 RP11-832N8.1-001 processed_pseudogene Homo_sapiens 0 385
ENST00000525722 RPLP2-005 retained_intron Homo_sapiens 0 363
ENST00000526222 RPLP2-008 processed_transcript Homo_sapiens 0 350
ENST00000527517 RPLP2-007 retained_intron Homo_sapiens 0 270
ENST00000530398 RPLP2-009 protein_coding Homo_sapiens 0 359
ENST00000530797 RPLP2-002 protein_coding Homo_sapiens 0 508
ENST00000532004 RPLP2-004 processed_transcript Homo_sapiens 0 361

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