C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sphingosine-1-phosphate phosphatase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021450 Sgpp1-201 ENSMUSG00000021054 10090 - 12:75714248-75735729 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021450
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021450 15.589±7.25 160.493±21.64 12.201±0.75 4.731±0.65 29.429±9.69 22.902±2.88 10.602±0.63 51.117±3.29 19.003±9.00 27.174±1.57 4.995±0.40 41.021±15.98 6.407±2.30 11.768±4.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SF CIL_0006SF_0003 CGP 12:75630596-75735729
CIL_0004WO CIL_0004WO_0002 CGP 12:75714248-76110926

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IDA endoplasmic reticulum
GO:0006665 IDA sphingolipid metabolic process
GO:0006668 IDA sphinganine-1-phosphate metabolic process
GO:0006670 IDA sphingosine metabolic process
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016311 IDA dephosphorylation
GO:0042392 IDA sphingosine-1-phosphate phosphatase activity
GO:0097191 IDA extrinsic apoptotic signaling pathway
GO:0097193 IDA intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000247225 SGPP1-001 protein_coding Homo_sapiens 0 1797

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