C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006ST_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000069662-ENSDARG00000069660 CGP 7955 7:23566760-23744978
GeneTranscriptPositionBiotype
ENSDARG00000069660 (chrnb1)
cholinergic receptor, nicotinic, beta 1 (muscle)
ENSDART00000101528 (chrnb1-001) 23711054-23744978 protein_coding
ENSDART00000149774 (chrnb1-002) 23730394-23736087 retained_intron
ENSDARG00000069662 (fgf11a)
fibroblast growth factor 11a
ENSDART00000101530 (fgf11a-201) 23566760-23692647 protein_coding
ENSDART00000137535 (fgf11a-002) 23635374-23692622 protein_coding
ENSDART00000144375 (fgf11a-001) 23566855-23692565 protein_coding
CIL_0006ST_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000161958-ENSG00000170175 CGP 9606 17:7438273-7457707
GeneTranscriptPositionBiotype
ENSG00000161958 (FGF11)
fibroblast growth factor 11
ENST00000293829 (FGF11-001) 7439027-7444937 protein_coding
ENST00000572907 (FGF11-004) 7439880-7443428 protein_coding
ENST00000575082 (FGF11-006) 7440743-7444902 protein_coding
ENST00000575235 (FGF11-002) 7438273-7443331 protein_coding
ENST00000575398 (FGF11-005) 7440742-7443556 protein_coding
ENST00000576328 (FGF11-007) 7440773-7442532 retained_intron
ENSG00000170175 (CHRNB1)
cholinergic receptor, nicotinic, beta 1 (muscle)
ENST00000306071 (CHRNB1-001) 7445061-7457707 protein_coding
ENST00000536404 (CHRNB1-002) 7445503-7456926 protein_coding
ENST00000570557 (CHRNB1-007) 7445339-7455860 protein_coding
ENST00000572857 (CHRNB1-004) 7445064-7447089 protein_coding
ENST00000573209 (CHRNB1-003) 7445543-7455689 retained_intron
ENST00000574054 (CHRNB1-005) 7445108-7445774 retained_intron
ENST00000575379 (CHRNB1-008) 7455594-7457329 protein_coding
ENST00000576360 (CHRNB1-006) 7445531-7457315 protein_coding
ENSG00000262880 (RP11-104H15.7)
ENST00000575310 (RP11-104H15.7-001) 7420103-7444081 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006ST_0001ENSDARG00000069660ENSDART00000101528ENSDART00000149774ENSDARG00000069662ENSDART00000101530ENSDART00000137535ENSDART00000144375CIL_0006ST_0002ENSG00000161958ENST00000293829ENST00000572907ENST00000575082ENST00000575235ENST00000575398ENST00000576328ENSG00000170175ENST00000306071ENST00000536404ENST00000570557ENST00000572857ENST00000573209ENST00000574054ENST00000575379ENST00000576360ENSG00000262880ENST00000575310
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006ST_0001ENSDARG00000069660ENSDART00000101528ENSDARG00000069662ENSDART00000101530ENSDART00000137535ENSDART00000144375CIL_0006ST_0002ENSG00000161958ENST00000293829ENST00000575082ENSG00000170175ENST00000306071ENST00000536404ENST00000570557ENST00000572857ENST00000573209ENST00000575379ENST00000576360ENSG00000262880ENST00000575310
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000069660 ENSDART00000101528 N/A N/A N/A 0.108±0.11 N/A N/A 4.898±2.11 0.970±0.47 N/A N/A N/A N/A N/A N/A
ENSDART00000149774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000069662 ENSDART00000101530 N/A N/A N/A 0.659±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137535 N/A N/A N/A 0.400±0.00 N/A N/A N/A N/A 0.081±0.00 N/A N/A N/A N/A N/A
ENSDART00000144375 N/A N/A N/A N/A N/A N/A 0.196±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000161958 ENST00000293829 0.402±0.00 2.404±0.00 N/A 2.021±0.00 0.683±0.00 0.363±0.00 N/A 1.370±0.00 N/A N/A N/A 0.632±0.00 N/A N/A
ENST00000572907 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575082 N/A N/A N/A 1.919±0.00 N/A N/A 2.086±0.00 1.206±0.00 N/A 0.466±0.00 N/A 1.617±0.11 N/A N/A
ENST00000575235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000170175 ENST00000306071 0.377±0.00 N/A N/A 1.300±0.00 1.091±0.59 N/A 1.350±0.00 1.444±1.14 1.315±0.00 0.479±0.36 17.142±5.02 1.907±0.00 6.393±3.16 3.258±0.00
ENST00000536404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.826±0.00 N/A N/A N/A
ENST00000570557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.533±4.43 15.146±0.00 N/A
ENST00000572857 N/A N/A N/A N/A N/A 0.494±0.00 N/A N/A N/A N/A N/A 2.206±0.00 N/A N/A
ENST00000573209 N/A N/A N/A N/A N/A N/A N/A 0.474±0.00 N/A N/A N/A N/A N/A N/A
ENST00000574054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575379 1.843±0.00 4.727±0.00 0.419±0.00 2.094±0.75 2.874±2.15 2.134±0.00 2.224±0.00 2.864±1.44 0.752±0.19 2.253±0.00 N/A 6.349±1.45 7.379±1.10 N/A
ENST00000576360 N/A N/A N/A N/A N/A 0.326±0.00 N/A 0.578±0.00 N/A N/A N/A 14.948±0.00 9.970±0.00 N/A
ENSG00000262880 ENST00000575310 N/A N/A N/A N/A N/A 0.191±0.00 N/A N/A N/A N/A N/A N/A N/A 4.445±0.25

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