C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006UP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000060316-ENSDARG00000078894 CGP 7955 6:41434718-41467187
GeneTranscriptPositionBiotype
ENSDARG00000060316 (cish)
cytokine inducible SH2-containing protein
ENSDART00000084861 (cish-001) 41434984-41437613 protein_coding
ENSDART00000136538 (cish-003) 41434718-41436976 protein_coding
ENSDART00000140108 (cish-002) 41434835-41436103 protein_coding
ENSDART00000140573 (cish-004) 41435979-41436850 retained_intron
ENSDARG00000078894 (hemk1)
HemK methyltransferase family member 1
ENSDART00000113157 (hemk1-001) 41440999-41467187 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0006UP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032578-ENSMUSG00000032579 CGP 10090 9:107296026-107338350
GeneTranscriptPositionBiotype
ENSMUSG00000032578 (Cish)
cytokine inducible SH2-containing protein
ENSMUST00000085102 (Cish-001) 107296026-107301987 protein_coding
ENSMUST00000165664 (Cish-003) 107296907-107301943 processed_transcript
ENSMUST00000167072 (Cish-005) 107296912-107300551 protein_coding
ENSMUST00000168260 (Cish-002) 107296710-107302784 protein_coding
ENSMUST00000171568 (Cish-004) 107299155-107300458 protein_coding
ENSMUSG00000032579 (Hemk1)
HemK methyltransferase family member 1
ENSMUST00000035196 (Hemk1-001) 107327703-107338350 protein_coding
ENSMUST00000118051 (Hemk1-005) 107327991-107338332 protein_coding
ENSMUST00000126392 (Hemk1-004) 107337146-107337655 protein_coding
ENSMUST00000128396 (Hemk1-006) 107327710-107336663 processed_transcript
ENSMUST00000128895 (Hemk1-003) 107335145-107338301 retained_intron
ENSMUST00000148165 (Hemk1-002) 107327692-107338317 retained_intron
ENSMUSG00000090570 (Gm17041)
predicted gene 17041
ENSMUST00000163196 (Gm17041-001) 107300380-107301838 antisense

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006UP_0001ENSDARG00000060316ENSDART00000084861ENSDART00000136538ENSDART00000140108ENSDART00000140573ENSDARG00000078894ENSDART00000113157CIL_0006UP_0002ENSMUSG00000032578ENSMUST00000085102ENSMUST00000165664ENSMUST00000167072ENSMUST00000168260ENSMUST00000171568ENSMUSG00000032579ENSMUST00000035196ENSMUST00000118051ENSMUST00000126392ENSMUST00000128396ENSMUST00000128895ENSMUST00000148165ENSMUSG00000090570ENSMUST00000163196
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006UP_0001ENSDARG00000060316ENSDART00000084861ENSDART00000136538ENSDART00000140108ENSDART00000140573ENSDARG00000078894ENSDART00000113157CIL_0006UP_0002ENSMUSG00000032578ENSMUST00000085102ENSMUST00000165664ENSMUST00000168260ENSMUSG00000032579ENSMUST00000035196ENSMUST00000118051ENSMUST00000128396ENSMUST00000128895ENSMUST00000148165ENSMUSG00000090570ENSMUST00000163196
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000060316 ENSDART00000084861 N/A N/A N/A 0.924±0.40 N/A N/A 11.895±8.93 7.073±1.90 5.695±0.00 N/A 8.096±0.00 N/A N/A N/A
ENSDART00000136538 N/A N/A N/A 0.321±0.00 N/A N/A N/A N/A 2.040±0.00 N/A N/A N/A N/A N/A
ENSDART00000140108 N/A N/A N/A N/A N/A N/A N/A N/A 5.571±0.00 N/A N/A N/A N/A N/A
ENSDART00000140573 N/A N/A N/A N/A N/A N/A N/A N/A 5.809±0.00 N/A N/A N/A N/A N/A
ENSDARG00000078894 ENSDART00000113157 N/A N/A N/A 1.984±1.43 N/A N/A 15.194±2.67 5.732±0.00 1.229±0.00 N/A 4.170±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032578 ENSMUST00000085102 1.105±0.48 1.740±0.37 2.611±0.42 0.393±0.00 6.257±1.15 4.122±0.81 4.338±0.00 4.883±1.29 2.455±1.69 4.482±2.04 3.058±1.61 3.986±1.28 0.740±0.40 0.488±0.14
ENSMUST00000165664 2.077±1.60 1.505±0.31 1.489±0.22 0.255±0.09 4.529±1.39 2.756±0.34 4.684±0.06 3.408±1.13 1.908±1.36 7.758±0.80 2.110±1.59 5.097±5.12 0.426±0.23 0.218±0.07
ENSMUST00000167072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168260 1.604±1.21 5.528±1.24 N/A 0.438±0.00 5.976±2.00 2.049±0.10 8.465±3.57 6.110±1.51 1.404±0.25 5.014±0.72 N/A 4.429±1.19 0.266±0.00 0.362±0.00
ENSMUST00000171568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000032579 ENSMUST00000035196 4.219±1.31 4.051±0.97 2.482±0.08 3.020±0.89 3.696±1.47 2.931±0.83 4.817±0.86 5.273±1.46 3.449±2.12 2.199±0.16 4.248±0.77 2.433±0.43 3.324±1.82 5.091±1.17
ENSMUST00000118051 8.663±0.75 4.804±0.00 N/A 5.029±0.00 11.793±5.10 5.984±0.00 6.027±0.26 7.072±1.06 4.818±0.24 6.228±0.00 N/A 7.489±0.83 N/A 7.582±0.00
ENSMUST00000126392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128396 N/A N/A N/A 9.338±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 5.524±0.00 N/A
ENSMUST00000128895 N/A N/A N/A N/A 2.271±0.00 N/A N/A N/A N/A N/A 1.533±0.31 1.876±0.40 0.409±0.00 N/A
ENSMUST00000148165 2.031±0.00 1.414±0.29 N/A N/A 1.633±0.26 1.179±0.24 N/A 1.416±0.24 0.371±0.00 1.521±0.54 0.442±0.00 1.812±0.00 0.551±0.00 1.084±0.00
ENSMUSG00000090570 ENSMUST00000163196 12.573±7.46 19.962±4.43 7.030±0.00 2.826±1.05 42.117±6.76 19.245±4.54 61.742±19.41 40.384±10.83 12.455±7.88 43.987±3.89 6.363±1.00 29.316±16.84 3.886±0.89 2.343±0.52

Loading