C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006UP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000060316-ENSDARG00000078894 CGP 7955 6:41434718-41467187
GeneTranscriptPositionBiotype
ENSDARG00000060316 (cish)
cytokine inducible SH2-containing protein
ENSDART00000084861 (cish-001) 41434984-41437613 protein_coding
ENSDART00000136538 (cish-003) 41434718-41436976 protein_coding
ENSDART00000140108 (cish-002) 41434835-41436103 protein_coding
ENSDART00000140573 (cish-004) 41435979-41436850 retained_intron
ENSDARG00000078894 (hemk1)
HemK methyltransferase family member 1
ENSDART00000113157 (hemk1-001) 41440999-41467187 protein_coding
CIL_0006UP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032578-ENSMUSG00000032579 CGP 10090 9:107296026-107338350
GeneTranscriptPositionBiotype
ENSMUSG00000032578 (Cish)
cytokine inducible SH2-containing protein
ENSMUST00000085102 (Cish-001) 107296026-107301987 protein_coding
ENSMUST00000165664 (Cish-003) 107296907-107301943 processed_transcript
ENSMUST00000167072 (Cish-005) 107296912-107300551 protein_coding
ENSMUST00000168260 (Cish-002) 107296710-107302784 protein_coding
ENSMUST00000171568 (Cish-004) 107299155-107300458 protein_coding
ENSMUSG00000032579 (Hemk1)
HemK methyltransferase family member 1
ENSMUST00000035196 (Hemk1-001) 107327703-107338350 protein_coding
ENSMUST00000118051 (Hemk1-005) 107327991-107338332 protein_coding
ENSMUST00000126392 (Hemk1-004) 107337146-107337655 protein_coding
ENSMUST00000128396 (Hemk1-006) 107327710-107336663 processed_transcript
ENSMUST00000128895 (Hemk1-003) 107335145-107338301 retained_intron
ENSMUST00000148165 (Hemk1-002) 107327692-107338317 retained_intron
ENSMUSG00000090570 (Gm17041)
predicted gene 17041
ENSMUST00000163196 (Gm17041-001) 107300380-107301838 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006UP_0001ENSDARG00000060316ENSDART00000084861ENSDART00000136538ENSDART00000140108ENSDART00000140573ENSDARG00000078894ENSDART00000113157CIL_0006UP_0002ENSMUSG00000032578ENSMUST00000085102ENSMUST00000165664ENSMUST00000167072ENSMUST00000168260ENSMUST00000171568ENSMUSG00000032579ENSMUST00000035196ENSMUST00000118051ENSMUST00000126392ENSMUST00000128396ENSMUST00000128895ENSMUST00000148165ENSMUSG00000090570ENSMUST00000163196
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006UP_0001ENSDARG00000060316ENSDART00000084861ENSDART00000136538ENSDART00000140108ENSDART00000140573ENSDARG00000078894ENSDART00000113157CIL_0006UP_0002ENSMUSG00000032578ENSMUST00000085102ENSMUST00000165664ENSMUST00000168260ENSMUSG00000032579ENSMUST00000035196ENSMUST00000118051ENSMUST00000128396ENSMUST00000128895ENSMUST00000148165ENSMUSG00000090570ENSMUST00000163196
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000060316 ENSDART00000084861 N/A N/A N/A 0.924±0.40 N/A N/A 11.895±8.93 7.073±1.90 5.695±0.00 N/A 8.096±0.00 N/A N/A N/A
ENSDART00000136538 N/A N/A N/A 0.321±0.00 N/A N/A N/A N/A 2.040±0.00 N/A N/A N/A N/A N/A
ENSDART00000140108 N/A N/A N/A N/A N/A N/A N/A N/A 5.571±0.00 N/A N/A N/A N/A N/A
ENSDART00000140573 N/A N/A N/A N/A N/A N/A N/A N/A 5.809±0.00 N/A N/A N/A N/A N/A
ENSDARG00000078894 ENSDART00000113157 N/A N/A N/A 1.984±1.43 N/A N/A 15.194±2.67 5.732±0.00 1.229±0.00 N/A 4.170±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032578 ENSMUST00000085102 1.105±0.48 1.740±0.37 2.611±0.42 0.393±0.00 6.257±1.15 4.122±0.81 4.338±0.00 4.883±1.29 2.455±1.69 4.482±2.04 3.058±1.61 3.986±1.28 0.740±0.40 0.488±0.14
ENSMUST00000165664 2.077±1.60 1.505±0.31 1.489±0.22 0.255±0.09 4.529±1.39 2.756±0.34 4.684±0.06 3.408±1.13 1.908±1.36 7.758±0.80 2.110±1.59 5.097±5.12 0.426±0.23 0.218±0.07
ENSMUST00000167072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168260 1.604±1.21 5.528±1.24 N/A 0.438±0.00 5.976±2.00 2.049±0.10 8.465±3.57 6.110±1.51 1.404±0.25 5.014±0.72 N/A 4.429±1.19 0.266±0.00 0.362±0.00
ENSMUST00000171568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000032579 ENSMUST00000035196 4.219±1.31 4.051±0.97 2.482±0.08 3.020±0.89 3.696±1.47 2.931±0.83 4.817±0.86 5.273±1.46 3.449±2.12 2.199±0.16 4.248±0.77 2.433±0.43 3.324±1.82 5.091±1.17
ENSMUST00000118051 8.663±0.75 4.804±0.00 N/A 5.029±0.00 11.793±5.10 5.984±0.00 6.027±0.26 7.072±1.06 4.818±0.24 6.228±0.00 N/A 7.489±0.83 N/A 7.582±0.00
ENSMUST00000126392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128396 N/A N/A N/A 9.338±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 5.524±0.00 N/A
ENSMUST00000128895 N/A N/A N/A N/A 2.271±0.00 N/A N/A N/A N/A N/A 1.533±0.31 1.876±0.40 0.409±0.00 N/A
ENSMUST00000148165 2.031±0.00 1.414±0.29 N/A N/A 1.633±0.26 1.179±0.24 N/A 1.416±0.24 0.371±0.00 1.521±0.54 0.442±0.00 1.812±0.00 0.551±0.00 1.084±0.00
ENSMUSG00000090570 ENSMUST00000163196 12.573±7.46 19.962±4.43 7.030±0.00 2.826±1.05 42.117±6.76 19.245±4.54 61.742±19.41 40.384±10.83 12.455±7.88 43.987±3.89 6.363±1.00 29.316±16.84 3.886±0.89 2.343±0.52

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